Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 IGBP1P1-201ENST00000554337 1009 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC011445.2-201ENST00000599274 173 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AC063977.5-201ENST00000601044 974 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AL031658.2-201ENST00000616850 651 ntBASIC6.74□□□□□ -1.33
TOP1P11387 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.74□□□□□ -1.33
TOP1P11387 AL355480.1-201ENST00000629041 99 ntBASIC6.74□□□□□ -1.33
TOP1P11387 MIR4302-201ENST00000638058 60 ntBASIC6.74□□□□□ -1.33
TOP1P11387 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.74□□□□□ -1.33
TOP1P11387 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 AC007842.1-201ENST00000597336 2039 ntBASIC6.74□□□□□ -1.33
TOP1P11387 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP1P11387 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP1P11387 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 RNA5SP46-201ENST00000362370 120 ntBASIC6.73□□□□□ -1.33
TOP1P11387 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 BMS1P17-202ENST00000416720 316 ntBASIC6.73□□□□□ -1.33
TOP1P11387 NIFKP3-201ENST00000417799 865 ntBASIC6.73□□□□□ -1.33
TOP1P11387 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 AC002504.1-201ENST00000438281 691 ntBASIC6.73□□□□□ -1.33
TOP1P11387 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 PPIAP20-201ENST00000449839 135 ntBASIC6.73□□□□□ -1.33
TOP1P11387 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 RN7SL174P-201ENST00000475578 289 ntBASIC6.73□□□□□ -1.33
TOP1P11387 AC073610.1-201ENST00000489971 396 ntBASIC6.73□□□□□ -1.33
TOP1P11387 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 SNORA43.3-201ENST00000517240 103 ntBASIC6.73□□□□□ -1.33
TOP1P11387 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 MRPS16P1-201ENST00000523462 412 ntBASIC6.73□□□□□ -1.33
TOP1P11387 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.73□□□□□ -1.33
TOP1P11387 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.73□□□□□ -1.33
TOP1P11387 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 AL355834.1-201ENST00000556602 3965 ntBASIC6.73□□□□□ -1.33
TOP1P11387 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 MFSD8-239ENST00000641590 2479 ntBASIC6.73□□□□□ -1.33
TOP1P11387 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
TOP1P11387 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP1P11387 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP1P11387 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP1P11387 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
TOP1P11387 OR4G1P-202ENST00000641173 1788 ntBASIC6.72□□□□□ -1.33
TOP1P11387 GTF2IP4-201ENST00000453092 2054 ntBASIC6.72□□□□□ -1.33
TOP1P11387 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 RN7SKP293-201ENST00000411389 296 ntBASIC6.72□□□□□ -1.33
TOP1P11387 OR2AT2P-201ENST00000413438 905 ntBASIC6.72□□□□□ -1.33
TOP1P11387 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.72□□□□□ -1.33
TOP1P11387 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 AC005297.1-201ENST00000444765 862 ntBASIC6.72□□□□□ -1.33
TOP1P11387 OR7E116P-201ENST00000448529 957 ntBASIC6.72□□□□□ -1.33
TOP1P11387 YWHAEP1-201ENST00000453697 763 ntBASIC6.72□□□□□ -1.33
TOP1P11387 AC023141.9-201ENST00000458734 412 ntBASIC6.72□□□□□ -1.33
TOP1P11387 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 RN7SL717P-201ENST00000478343 297 ntBASIC6.72□□□□□ -1.33
TOP1P11387 RPS3AP15-201ENST00000483874 781 ntBASIC6.72□□□□□ -1.33
TOP1P11387 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.72□□□□□ -1.33
TOP1P11387 AC138866.2-201ENST00000508650 584 ntBASIC6.72□□□□□ -1.33
TOP1P11387 ST13P12-201ENST00000508958 1094 ntBASIC6.72□□□□□ -1.33
TOP1P11387 snoU109.5-201ENST00000516231 132 ntBASIC6.72□□□□□ -1.33
TOP1P11387 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 AC126615.2-201ENST00000553003 515 ntBASIC6.72□□□□□ -1.33
TOP1P11387 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP1P11387 AL163952.1-202ENST00000569625 600 ntBASIC6.72□□□□□ -1.33
TOP1P11387 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.72□□□□□ -1.33
TOP1P11387 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 AP000432.2-201ENST00000624164 2048 ntBASIC6.72□□□□□ -1.33
TOP1P11387 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.72□□□□□ -1.33
TOP1P11387 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP1P11387 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms