Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC092349.1-201ENST00000504903 310 ntBASIC4.72□□□□□ -1.65
CTSDP07339 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AC074255.1-201ENST00000511259 501 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AC021193.1-201ENST00000511607 420 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.72□□□□□ -1.65
CTSDP07339 AC091078.2-201ENST00000557145 559 ntBASIC4.72□□□□□ -1.65
CTSDP07339 NMNAT1P5-201ENST00000559657 841 ntBASIC4.72□□□□□ -1.65
CTSDP07339 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 AC008833.1-201ENST00000611633 691 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AC241377.1-201ENST00000619797 406 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.72□□□□□ -1.65
CTSDP07339 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CTSDP07339 AC104964.3-201ENST00000606115 2860 ntBASIC4.71□□□□□ -1.65
CTSDP07339 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.71□□□□□ -1.65
CTSDP07339 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CTSDP07339 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CTSDP07339 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.71□□□□□ -1.65
CTSDP07339 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.71□□□□□ -1.65
CTSDP07339 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CTSDP07339 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTSDP07339 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTSDP07339 RNA5SP110-201ENST00000362638 115 ntBASIC4.71□□□□□ -1.66
CTSDP07339 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CTSDP07339 AC016739.1-201ENST00000405359 345 ntBASIC4.71□□□□□ -1.66
CTSDP07339 RNA5SP431-201ENST00000410312 120 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 NANOGP9-201ENST00000439890 892 ntBASIC4.71□□□□□ -1.66
CTSDP07339 EIF5AP4-201ENST00000441206 465 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 AC092106.1-201ENST00000444291 373 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.71□□□□□ -1.66
CTSDP07339 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 RN7SL72P-201ENST00000460697 269 ntBASIC4.71□□□□□ -1.66
CTSDP07339 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.71□□□□□ -1.66
CTSDP07339 ZNF519P4-201ENST00000514008 125 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.71□□□□□ -1.66
CTSDP07339 RNA5SP441-201ENST00000516809 88 ntBASIC4.71□□□□□ -1.66
CTSDP07339 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 OR4A41P-201ENST00000533053 928 ntBASIC4.71□□□□□ -1.66
CTSDP07339 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.71□□□□□ -1.66
CTSDP07339 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.71□□□□□ -1.66
CTSDP07339 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 AC121758.1-202ENST00000556917 658 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.71□□□□□ -1.66
CTSDP07339 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.71□□□□□ -1.66
CTSDP07339 AGGF1P7-201ENST00000562369 913 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC093591.2-201ENST00000565254 3843 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC009852.2-201ENST00000567898 485 ntBASIC4.71□□□□□ -1.66
CTSDP07339 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 AC008507.3-201ENST00000585753 472 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 AL356608.1-201ENST00000610034 820 ntBASIC4.71□□□□□ -1.66
CTSDP07339 uc_338.29-201ENST00000615099 168 ntBASIC4.71□□□□□ -1.66
CTSDP07339 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.71□□□□□ -1.66
CTSDP07339 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTSDP07339 AL360270.2-201ENST00000562952 5985 ntBASIC4.71□□□□□ -1.66
CTSDP07339 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.71□□□□□ -1.66
CTSDP07339 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CTSDP07339 AC026523.2-201ENST00000625039 7739 ntBASIC4.71□□□□□ -1.66
CTSDP07339 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.71□□□□□ -1.66
CTSDP07339 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTSDP07339 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.7□□□□□ -1.66
CTSDP07339 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.7□□□□□ -1.66
CTSDP07339 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC4.7□□□□□ -1.66
CTSDP07339 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CTSDP07339 AP005432.1-201ENST00000580891 3485 ntBASIC4.7□□□□□ -1.66
CTSDP07339 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.7□□□□□ -1.66
CTSDP07339 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms