Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA33.2-201ENST00000365413 134 ntBASIC8.52□□□□□ -1.05
RNF40O75150 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 RNU6-196P-201ENST00000384315 107 ntBASIC8.52□□□□□ -1.05
RNF40O75150 IGHV4-59-201ENST00000390629 495 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
RNF40O75150 AL049693.1-201ENST00000402760 611 ntBASIC8.52□□□□□ -1.05
RNF40O75150 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 BTF3P9-201ENST00000418784 283 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 RPL36P1-201ENST00000419720 225 ntBASIC8.52□□□□□ -1.05
RNF40O75150 RPL4P4-201ENST00000422486 1284 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AL358176.2-201ENST00000425769 204 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC8.52□□□□□ -1.05
RNF40O75150 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 AC002069.1-201ENST00000429649 1159 ntBASIC8.52□□□□□ -1.05
RNF40O75150 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AL353754.1-201ENST00000440219 340 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AL353898.1-201ENST00000444055 238 ntBASIC8.52□□□□□ -1.05
RNF40O75150 RPL7P48-201ENST00000461513 746 ntBASIC8.52□□□□□ -1.05
RNF40O75150 RN7SL757P-201ENST00000466709 301 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC8.52□□□□□ -1.05
RNF40O75150 AC107398.1-201ENST00000486904 505 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC012170.1-201ENST00000495139 359 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC139783.2-201ENST00000504847 1145 ntBASIC8.52□□□□□ -1.05
RNF40O75150 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 AC093809.1-201ENST00000509155 340 ntBASIC8.52□□□□□ -1.05
RNF40O75150 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC8.52□□□□□ -1.05
RNF40O75150 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.52□□□□□ -1.05
RNF40O75150 GZMB-205ENST00000526004 819 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC8.52□□□□□ -1.05
RNF40O75150 AC019322.1-201ENST00000571869 389 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC018638.8-201ENST00000588755 281 ntBASIC8.52□□□□□ -1.05
RNF40O75150 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 AC007687.1-201ENST00000602704 304 ntBASIC8.52□□□□□ -1.05
RNF40O75150 CASC15-205ENST00000606336 1288 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 AL451054.3-201ENST00000611115 776 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC123788.2-201ENST00000612290 283 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC008250.2-201ENST00000615261 205 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC243756.2-201ENST00000618406 463 ntBASIC8.52□□□□□ -1.05
RNF40O75150 C2orf27A-204ENST00000623058 969 ntBASIC8.52□□□□□ -1.05
RNF40O75150 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 AC245177.1-201ENST00000375625 2369 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 AC239585.1-201ENST00000375644 2369 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 MAPK10-319ENST00000641459 2542 ntBASIC8.52□□□□□ -1.05
RNF40O75150 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.52□□□□□ -1.05
RNF40O75150 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 CDHR3-201ENST00000317716 3813 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
RNF40O75150 CACNB4-269ENST00000638005 4615 ntTSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.52□□□□□ -1.05
RNF40O75150 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 ABCA11P-202ENST00000504019 2110 ntBASIC8.51□□□□□ -1.05
RNF40O75150 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 PPWD1-201ENST00000261308 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 LYARP1-201ENST00000436977 1501 ntBASIC8.51□□□□□ -1.05
RNF40O75150 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 AC092999.1-201ENST00000624004 1924 ntBASIC8.51□□□□□ -1.05
RNF40O75150 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 Y_RNA.128-201ENST00000363391 112 ntBASIC8.51□□□□□ -1.05
RNF40O75150 SNORA71D-201ENST00000363484 134 ntBASIC8.51□□□□□ -1.05
RNF40O75150 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
RNF40O75150 AC133644.1-201ENST00000398171 937 ntBASIC8.51□□□□□ -1.05
RNF40O75150 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.51□□□□□ -1.05
RNF40O75150 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 HCG21-204ENST00000419481 605 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC8.51□□□□□ -1.05
RNF40O75150 AC126124.1-201ENST00000426104 185 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC8.51□□□□□ -1.05
RNF40O75150 AC024082.2-201ENST00000434771 238 ntBASIC8.51□□□□□ -1.05
RNF40O75150 RPL15P1-201ENST00000439981 600 ntBASIC8.51□□□□□ -1.05
RNF40O75150 PGBD4P3-201ENST00000440731 581 ntBASIC8.51□□□□□ -1.05
RNF40O75150 ACTP1-201ENST00000440793 383 ntBASIC8.51□□□□□ -1.05
RNF40O75150 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
RNF40O75150 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC8.51□□□□□ -1.05
RNF40O75150 DHFRP3-201ENST00000455595 559 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms