Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 RPL12P48-201ENST00000605620 304 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 FO681491.1-202ENST00000623392 737 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
UPK1AO00322 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
UPK1AO00322 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 HSPD1P7-201ENST00000447985 1686 ntBASIC5.37□□□□□ -1.55
UPK1AO00322 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
UPK1AO00322 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
UPK1AO00322 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPK1AO00322 AL137141.1-201ENST00000624622 4836 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC018628.1-201ENST00000624147 3819 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.36□□□□□ -1.55
UPK1AO00322 MAPK10-338ENST00000641647 3362 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPK1AO00322 MIR130A-201ENST00000385274 89 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 HYALP1-201ENST00000417674 1279 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 NIFKP3-201ENST00000417799 865 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 HSPE1P27-201ENST00000430808 296 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.36□□□□□ -1.55
UPK1AO00322 AL359265.1-201ENST00000440296 795 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 MEMO1P4-201ENST00000453590 386 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 RPS7P6-201ENST00000485777 579 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 DUTP1-201ENST00000493631 470 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 OR4A17P-201ENST00000526032 904 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 COX6CP7-201ENST00000597056 208 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 AC002069.2-201ENST00000603580 883 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 AL499605.1-201ENST00000604628 403 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 MIR6071-201ENST00000616741 78 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.36□□□□□ -1.55
UPK1AO00322 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.36□□□□□ -1.55
UPK1AO00322 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
UPK1AO00322 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UPK1AO00322 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
UPK1AO00322 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
UPK1AO00322 AC104964.3-201ENST00000606115 2860 ntBASIC5.36□□□□□ -1.55
UPK1AO00322 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
UPK1AO00322 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
UPK1AO00322 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC004656.1-201ENST00000568479 4951 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.35□□□□□ -1.55
UPK1AO00322 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.35□□□□□ -1.55
UPK1AO00322 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
UPK1AO00322 CXADRP1-201ENST00000398098 1095 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AK4P4-201ENST00000419465 646 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC115283.1-201ENST00000427353 400 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.35□□□□□ -1.55
UPK1AO00322 NDUFB4P8-201ENST00000435351 367 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 LINC02210-201ENST00000444561 288 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 ACA64.1-201ENST00000459171 127 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 RPS23P2-201ENST00000463671 415 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 RN7SL570P-201ENST00000484405 292 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC073610.1-201ENST00000489971 396 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.35□□□□□ -1.55
UPK1AO00322 SCARNA6.1-201ENST00000516989 238 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC021678.3-201ENST00000517893 476 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC005363.1-201ENST00000530779 351 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.35□□□□□ -1.55
UPK1AO00322 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC125494.2-201ENST00000602431 657 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 AC067773.1-201ENST00000603284 1094 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
UPK1AO00322 CXADRP3-202ENST00000617265 1100 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.35□□□□□ -1.55
UPK1AO00322 AC099654.11-201ENST00000638857 294 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 OR8G3P-202ENST00000641572 1255 ntBASIC5.35□□□□□ -1.55
UPK1AO00322 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms