Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 Y_RNA.710-201ENST00000516975 110 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 IGLV3-24-201ENST00000517477 197 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.59□□□□□ -1.51
PDLIM1O00151 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC005828.7-201ENST00000607331 556 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 uc_338.26-201ENST00000612659 160 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC010998.3-201ENST00000613871 631 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.59□□□□□ -1.51
PDLIM1O00151 FRG1EP-201ENST00000634469 770 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 OR8A1-204ENST00000642111 1145 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDLIM1O00151 AC130304.1-201ENST00000622942 2385 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AC007996.1-201ENST00000620414 2821 ntBASIC5.59□□□□□ -1.51
PDLIM1O00151 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.59□□□□□ -1.52
PDLIM1O00151 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.52
PDLIM1O00151 AL137141.1-201ENST00000624622 4836 ntBASIC5.59□□□□□ -1.52
PDLIM1O00151 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.59□□□□□ -1.52
PDLIM1O00151 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PDLIM1O00151 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 SMG1P7-201ENST00000565246 2704 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDLIM1O00151 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDLIM1O00151 UBBP2-201ENST00000376781 231 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC099535.1-201ENST00000408928 371 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 SOCS5P1-201ENST00000440415 949 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AL512593.1-201ENST00000444758 779 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 POU5F1P5-201ENST00000445059 658 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PDLIM1O00151 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 RNA5SP103-201ENST00000459503 118 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 RN7SL104P-201ENST00000498686 293 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 OR4D12P-201ENST00000509361 911 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC036111.2-201ENST00000533247 901 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AC084824.2-201ENST00000548906 345 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AL078601.3-201ENST00000573303 535 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AC008555.7-201ENST00000605008 583 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AC015849.6-201ENST00000605454 474 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AL133481.2-203ENST00000607558 139 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 MIR6780B-201ENST00000610307 79 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 AL355974.3-201ENST00000617383 467 ntBASIC5.58□□□□□ -1.52
PDLIM1O00151 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
PDLIM1O00151 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PDLIM1O00151 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.58□□□□□ -1.52
PDLIM1O00151 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PDLIM1O00151 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 AL359643.1-201ENST00000404109 423 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 MTND6P12-201ENST00000428247 522 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AC242426.1-201ENST00000435270 960 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 GAPDHP59-201ENST00000435908 267 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 PPIAP10-201ENST00000438675 458 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 CXCR2P1-202ENST00000443392 1074 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM1O00151 RPS23P9-201ENST00000448848 438 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.57□□□□□ -1.52
PDLIM1O00151 RN7SL326P-201ENST00000477493 296 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 OR7E22P-201ENST00000478335 1035 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AC079080.1-201ENST00000479841 822 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 AC091874.2-201ENST00000505889 720 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AC138409.2-202ENST00000507274 458 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.57□□□□□ -1.52
PDLIM1O00151 ZNF519P4-201ENST00000514008 125 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 SETP21-201ENST00000514799 892 ntBASIC5.57□□□□□ -1.52
PDLIM1O00151 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms