Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC6.3□□□□□ -1.4
SHISA3A0PJX4 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 HNRNPA1P54-201ENST00000411857 9714 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 SNORA4.1-201ENST00000364263 144 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RNU6-259P-201ENST00000383999 107 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RAN-201ENST00000392367 780 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL451048.1-201ENST00000413328 217 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 PTP4A1P1-201ENST00000420539 515 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 USP9YP18-201ENST00000425912 695 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RNF11P2-201ENST00000427702 440 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 MTND3P23-201ENST00000431980 347 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CICP10-201ENST00000439497 198 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL033379.1-201ENST00000442184 481 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL034399.1-201ENST00000451535 380 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC123768.1-202ENST00000460684 461 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RN7SL621P-201ENST00000472565 299 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RN7SL368P-201ENST00000473384 277 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 VPS26AP1-201ENST00000483197 979 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ACTG1P13-201ENST00000486987 1043 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ST13P12-201ENST00000508958 1094 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 RNU6-506P-201ENST00000516553 94 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 IGKV2OR22-4-201ENST00000523309 367 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 OR4R3P-201ENST00000525084 838 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AP000893.2-201ENST00000527550 433 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 EEF1A1P17-201ENST00000547505 1275 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC126177.6-201ENST00000550420 1009 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 HNRNPA1P71-201ENST00000559135 950 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC015818.6-201ENST00000584274 634 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC091132.5-205ENST00000585761 560 ntTSL 4 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC00674-202ENST00000590734 160 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CARSP1-201ENST00000603171 889 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC018737.1-201ENST00000603900 204 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL390816.3-201ENST00000604527 1066 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC019072.1-201ENST00000604535 1551 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC123788.2-201ENST00000612290 283 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 GTF2IP1-202ENST00000614592 2047 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC138932.5-201ENST00000617759 563 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL158175.1-201ENST00000634327 1127 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AC068205.4-201ENST00000637880 804 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AP000356.4-201ENST00000639500 172 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 AL157713.1-201ENST00000379752 1531 ntBASIC6.29□□□□□ -1.4
SHISA3A0PJX4 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 ZNF611-202ENST00000453741 4380 ntTSL 4 BASIC6.29□□□□□ -1.4
SHISA3A0PJX4 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.28□□□□□ -1.4
SHISA3A0PJX4 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms