Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CLNS1AP1-201ENST00000435954 682 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 RPS17P15-201ENST00000475609 349 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AP002884.1-201ENST00000479691 655 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 RPSAP51-201ENST00000497462 645 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 Vault.2-201ENST00000516519 98 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 MIR4311-201ENST00000580794 100 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC063977.5-201ENST00000601044 974 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AL139124.1-201ENST00000609123 421 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AL591926.1-201ENST00000620542 217 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 AC024884.1-201ENST00000620583 399 ntBASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRAV27A0A087WT01 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC079097.1-201ENST00000512187 1399 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SNORA64.1-201ENST00000362600 132 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SUGT1P2-201ENST00000379452 992 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC004386.1-201ENST00000393214 761 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC009784.1-201ENST00000426484 460 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 RPL7P56-201ENST00000429441 717 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC069154.1-201ENST00000432914 542 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 HMGB3P24-201ENST00000433260 622 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC110602.1-201ENST00000437414 318 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC073465.2-201ENST00000440938 498 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 IGBP1P3-201ENST00000447449 1000 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 ACA64.1-201ENST00000459171 127 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC022215.1-201ENST00000481770 362 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 TRIM51DP-201ENST00000529746 596 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC093524.1-201ENST00000564266 1094 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 OR8G3P-202ENST00000641572 1255 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AL592429.1-201ENST00000403909 1473 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 MRE11P1-201ENST00000464884 2127 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 AP001029.2-203ENST00000589795 4910 ntBASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAV27A0A087WT01 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 NEPNP-201ENST00000404786 1371 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AC016745.2-201ENST00000608834 3443 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AL035660.1-201ENST00000422041 222 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 NDUFB4P8-201ENST00000435351 367 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AL596266.1-201ENST00000448132 400 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 RPS23P6-201ENST00000466136 431 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 NENFP3-201ENST00000503735 313 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AC105420.1-201ENST00000504389 582 ntBASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAV27A0A087WT01 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 147.7 ms