Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HINT3Q9NQE9 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HINT3Q9NQE9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 AC068338.2-201ENST00000563278 1430 ntBASIC17.74■□□□□ 0.43
HINT3Q9NQE9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 NCF1B-203ENST00000435988 1254 ntBASIC17.74■□□□□ 0.43
HINT3Q9NQE9 RARRES2P4-201ENST00000514074 484 ntBASIC17.74■□□□□ 0.43
HINT3Q9NQE9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 AC008694.1-202ENST00000636953 945 ntBASIC17.74■□□□□ 0.43
HINT3Q9NQE9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HINT3Q9NQE9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 AC120498.9-201ENST00000339021 3867 ntBASIC17.73■□□□□ 0.43
HINT3Q9NQE9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 AL121832.2-201ENST00000610979 668 ntBASIC17.73■□□□□ 0.43
HINT3Q9NQE9 AL050303.2-201ENST00000619798 666 ntBASIC17.73■□□□□ 0.43
HINT3Q9NQE9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
HINT3Q9NQE9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 GPX1P1-201ENST00000388829 606 ntBASIC17.72■□□□□ 0.43
HINT3Q9NQE9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 HLA-L-209ENST00000420110 1011 ntBASIC17.72■□□□□ 0.43
HINT3Q9NQE9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.72■□□□□ 0.43
HINT3Q9NQE9 AC069236.1-201ENST00000604339 616 ntBASIC17.72■□□□□ 0.43
HINT3Q9NQE9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.72■□□□□ 0.43
HINT3Q9NQE9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HINT3Q9NQE9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HINT3Q9NQE9 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms