Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL25A1Q9BXS0 ZNF259P1-201ENST00000407656 1365 ntBASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 SAPCD2P3-201ENST00000455031 850 ntBASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.09■□□□□ 0.81
COL25A1Q9BXS0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC20.08■□□□□ 0.81
COL25A1Q9BXS0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL25A1Q9BXS0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL25A1Q9BXS0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.08■□□□□ 0.8
COL25A1Q9BXS0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
COL25A1Q9BXS0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 AF238378.1-201ENST00000526806 358 ntBASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 AC138932.3-201ENST00000567634 1902 ntBASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
COL25A1Q9BXS0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 FAM197Y8-203ENST00000450145 560 ntBASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 AC093909.1-201ENST00000504731 1122 ntBASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 AC134684.3-201ENST00000641758 218 ntBASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
COL25A1Q9BXS0 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COL25A1Q9BXS0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms