Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 AC110285.5-201ENST00000611501 352 ntBASIC17.5■□□□□ 0.39
USB1Q9BQ65 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 LINC01006-201ENST00000333319 2292 ntBASIC17.5■□□□□ 0.39
USB1Q9BQ65 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.5■□□□□ 0.39
USB1Q9BQ65 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
USB1Q9BQ65 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 RPS2P4-201ENST00000476944 856 ntBASIC17.49■□□□□ 0.39
USB1Q9BQ65 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 AC008550.1-201ENST00000511500 884 ntBASIC17.49■□□□□ 0.39
USB1Q9BQ65 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
USB1Q9BQ65 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 KRT8P17-201ENST00000453110 1448 ntBASIC17.48■□□□□ 0.39
USB1Q9BQ65 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
USB1Q9BQ65 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.48■□□□□ 0.39
USB1Q9BQ65 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 AC124016.1-201ENST00000609552 612 ntBASIC17.47■□□□□ 0.39
USB1Q9BQ65 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
USB1Q9BQ65 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.47■□□□□ 0.39
USB1Q9BQ65 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
USB1Q9BQ65 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
USB1Q9BQ65 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.46■□□□□ 0.39
USB1Q9BQ65 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms