Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 AP000593.1-201ENST00000393668 712 ntBASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 TUBB8P6-201ENST00000436895 1288 ntBASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ALMS1Q8TCU4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
ALMS1Q8TCU4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 TFP1-202ENST00000475455 1573 ntBASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 AL353719.1-201ENST00000566847 864 ntBASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ALMS1Q8TCU4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 NEK4P2-201ENST00000580004 1012 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 AC139530.3-201ENST00000620344 690 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 LINC01311-201ENST00000565162 1445 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 AP003041.3-201ENST00000527151 707 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 PRELID1P1-202ENST00000567272 903 ntBASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.32□□□□□ -0.28
ALMS1Q8TCU4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 AP002469.2-201ENST00000531724 424 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 AL031008.1-201ENST00000619963 541 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 AP002383.4-201ENST00000442518 975 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 AC112907.2-201ENST00000448639 330 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 MIR4674-201ENST00000582457 87 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 MIR3652-201ENST00000579335 131 ntBASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC13.31□□□□□ -0.28
ALMS1Q8TCU4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ALMS1Q8TCU4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms