Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.67■■□□□ 1.06
NME8Q8N427 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.67■■□□□ 1.06
NME8Q8N427 MIR1238-201ENST00000408483 83 ntBASIC21.67■■□□□ 1.06
NME8Q8N427 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.67■■□□□ 1.06
NME8Q8N427 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.67■■□□□ 1.06
NME8Q8N427 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.67■■□□□ 1.06
NME8Q8N427 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.67■■□□□ 1.06
NME8Q8N427 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NME8Q8N427 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.67■■□□□ 1.06
NME8Q8N427 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NME8Q8N427 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
NME8Q8N427 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 SMG8-203ENST00000578922 2178 ntBASIC21.66■■□□□ 1.06
NME8Q8N427 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 RCN1P1-201ENST00000400413 996 ntBASIC21.66■■□□□ 1.06
NME8Q8N427 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.66■■□□□ 1.06
NME8Q8N427 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.66■■□□□ 1.06
NME8Q8N427 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.66■■□□□ 1.06
NME8Q8N427 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
NME8Q8N427 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.66■■□□□ 1.06
NME8Q8N427 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NME8Q8N427 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NME8Q8N427 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.65■■□□□ 1.06
NME8Q8N427 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.65■■□□□ 1.06
NME8Q8N427 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.65■■□□□ 1.06
NME8Q8N427 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NME8Q8N427 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.65■■□□□ 1.06
NME8Q8N427 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.65■■□□□ 1.06
NME8Q8N427 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC21.65■■□□□ 1.06
NME8Q8N427 AC131212.4-201ENST00000623606 975 ntBASIC21.65■■□□□ 1.06
NME8Q8N427 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.65■■□□□ 1.06
NME8Q8N427 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NME8Q8N427 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NME8Q8N427 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NME8Q8N427 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
NME8Q8N427 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NME8Q8N427 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.64■■□□□ 1.06
NME8Q8N427 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.64■■□□□ 1.05
NME8Q8N427 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
NME8Q8N427 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.64■■□□□ 1.05
NME8Q8N427 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC21.64■■□□□ 1.05
NME8Q8N427 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.64■■□□□ 1.05
NME8Q8N427 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NME8Q8N427 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NME8Q8N427 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NME8Q8N427 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
NME8Q8N427 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.64■■□□□ 1.05
NME8Q8N427 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
NME8Q8N427 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NME8Q8N427 KRT8P9-201ENST00000558927 1449 ntBASIC21.63■■□□□ 1.05
NME8Q8N427 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.63■■□□□ 1.05
NME8Q8N427 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NME8Q8N427 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
NME8Q8N427 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
NME8Q8N427 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.63■■□□□ 1.05
NME8Q8N427 NAPSB-206ENST00000562112 1266 ntBASIC21.63■■□□□ 1.05
NME8Q8N427 AC010331.1-201ENST00000611423 582 ntBASIC21.63■■□□□ 1.05
NME8Q8N427 MIR6786-201ENST00000616843 113 ntBASIC21.63■■□□□ 1.05
NME8Q8N427 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NME8Q8N427 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.63■■□□□ 1.05
NME8Q8N427 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NME8Q8N427 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms