Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
COL23A1Q86Y22 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 RN7SL510P-201ENST00000581311 263 ntBASIC24.83■■□□□ 1.57
COL23A1Q86Y22 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL23A1Q86Y22 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC24.83■■□□□ 1.56
COL23A1Q86Y22 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC24.83■■□□□ 1.56
COL23A1Q86Y22 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 DERL1-203ENST00000419562 918 ntTSL 2 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
COL23A1Q86Y22 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 KRT8P45-201ENST00000414328 1447 ntBASIC24.81■■□□□ 1.56
COL23A1Q86Y22 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 LY6E-213ENST00000522528 606 ntTSL 3 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 BCL10-202ENST00000620248 774 ntTSL 5 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
COL23A1Q86Y22 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 AC005229.4-201ENST00000610085 2198 ntBASIC24.8■■□□□ 1.56
COL23A1Q86Y22 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 AP003041.3-201ENST00000527151 707 ntBASIC24.8■■□□□ 1.56
COL23A1Q86Y22 NPAP1P7-201ENST00000613027 823 ntBASIC24.8■■□□□ 1.56
COL23A1Q86Y22 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.8■■□□□ 1.56
COL23A1Q86Y22 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL23A1Q86Y22 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 GUSBP5-202ENST00000510805 1989 ntBASIC24.78■■□□□ 1.56
COL23A1Q86Y22 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.78■■□□□ 1.56
COL23A1Q86Y22 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC24.78■■□□□ 1.56
COL23A1Q86Y22 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL23A1Q86Y22 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms