Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 AL023875.1-201ENST00000640777 796 ntBASIC18.68■□□□□ 0.58
SKP1P63208 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.68■□□□□ 0.58
SKP1P63208 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
SKP1P63208 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.68■□□□□ 0.58
SKP1P63208 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SKP1P63208 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
SKP1P63208 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.67■□□□□ 0.58
SKP1P63208 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 KRASP1-201ENST00000407852 552 ntBASIC18.67■□□□□ 0.58
SKP1P63208 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.67■□□□□ 0.58
SKP1P63208 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.67■□□□□ 0.58
SKP1P63208 RPPH1-201ENST00000516869 333 ntBASIC18.67■□□□□ 0.58
SKP1P63208 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.67■□□□□ 0.58
SKP1P63208 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SKP1P63208 AC142381.4-202ENST00000563973 229 ntBASIC18.67■□□□□ 0.58
SKP1P63208 AC233263.1-201ENST00000578059 224 ntBASIC18.67■□□□□ 0.58
SKP1P63208 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.67■□□□□ 0.58
SKP1P63208 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SKP1P63208 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SKP1P63208 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.67■□□□□ 0.58
SKP1P63208 TMEM179-206ENST00000616017 1645 ntBASIC18.67■□□□□ 0.58
SKP1P63208 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SKP1P63208 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
SKP1P63208 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SKP1P63208 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SKP1P63208 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SKP1P63208 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.66■□□□□ 0.58
SKP1P63208 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.66■□□□□ 0.58
SKP1P63208 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.66■□□□□ 0.58
SKP1P63208 AC124016.1-201ENST00000609552 612 ntBASIC18.66■□□□□ 0.58
SKP1P63208 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SKP1P63208 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.66■□□□□ 0.58
SKP1P63208 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.66■□□□□ 0.58
SKP1P63208 AL691432.2-201ENST00000607222 2038 ntBASIC18.66■□□□□ 0.58
SKP1P63208 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SKP1P63208 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 UBE2SP1-201ENST00000450587 669 ntBASIC18.65■□□□□ 0.58
SKP1P63208 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.65■□□□□ 0.58
SKP1P63208 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SKP1P63208 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.65■□□□□ 0.58
SKP1P63208 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.65■□□□□ 0.58
SKP1P63208 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SKP1P63208 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms