Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
WNT3AP56704 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.89■□□□□ 0.77
WNT3AP56704 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
WNT3AP56704 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.89■□□□□ 0.77
WNT3AP56704 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.88■□□□□ 0.77
WNT3AP56704 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 POM121L13P-201ENST00000422362 380 ntBASIC19.88■□□□□ 0.77
WNT3AP56704 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.88■□□□□ 0.77
WNT3AP56704 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 AP003097.1-201ENST00000530657 1135 ntBASIC19.88■□□□□ 0.77
WNT3AP56704 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.88■□□□□ 0.77
WNT3AP56704 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
WNT3AP56704 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
WNT3AP56704 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
WNT3AP56704 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
WNT3AP56704 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
WNT3AP56704 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.87■□□□□ 0.77
WNT3AP56704 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
WNT3AP56704 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
WNT3AP56704 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.87■□□□□ 0.77
WNT3AP56704 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.87■□□□□ 0.77
WNT3AP56704 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.87■□□□□ 0.77
WNT3AP56704 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 AL121829.2-201ENST00000620908 328 ntBASIC19.87■□□□□ 0.77
WNT3AP56704 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
WNT3AP56704 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.87■□□□□ 0.77
WNT3AP56704 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
WNT3AP56704 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.87■□□□□ 0.77
WNT3AP56704 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.86■□□□□ 0.77
WNT3AP56704 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.86■□□□□ 0.77
WNT3AP56704 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.86■□□□□ 0.77
WNT3AP56704 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
WNT3AP56704 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
WNT3AP56704 AC026366.1-201ENST00000488803 879 ntBASIC19.86■□□□□ 0.77
WNT3AP56704 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.86■□□□□ 0.77
WNT3AP56704 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.86■□□□□ 0.77
WNT3AP56704 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
WNT3AP56704 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.85■□□□□ 0.77
WNT3AP56704 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.85■□□□□ 0.77
WNT3AP56704 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
WNT3AP56704 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.85■□□□□ 0.77
WNT3AP56704 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
WNT3AP56704 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.85■□□□□ 0.77
WNT3AP56704 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms