Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MTHFRP42898 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MTHFRP42898 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.6■□□□□ 0.89
MTHFRP42898 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.6■□□□□ 0.89
MTHFRP42898 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.6■□□□□ 0.89
MTHFRP42898 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 RNF152P1-201ENST00000397754 604 ntBASIC20.6■□□□□ 0.89
MTHFRP42898 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.6■□□□□ 0.89
MTHFRP42898 KRT18P16-201ENST00000510337 1294 ntBASIC20.6■□□□□ 0.89
MTHFRP42898 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 AP000692.2-201ENST00000608391 879 ntBASIC20.6■□□□□ 0.89
MTHFRP42898 AC116562.4-202ENST00000641738 218 ntBASIC20.6■□□□□ 0.89
MTHFRP42898 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MTHFRP42898 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.6■□□□□ 0.89
MTHFRP42898 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MTHFRP42898 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
MTHFRP42898 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.59■□□□□ 0.89
MTHFRP42898 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.59■□□□□ 0.89
MTHFRP42898 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
MTHFRP42898 INGX-201ENST00000359239 846 ntBASIC20.59■□□□□ 0.89
MTHFRP42898 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
MTHFRP42898 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.59■□□□□ 0.89
MTHFRP42898 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.59■□□□□ 0.89
MTHFRP42898 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.59■□□□□ 0.89
MTHFRP42898 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.59■□□□□ 0.89
MTHFRP42898 AC130371.2-201ENST00000619443 611 ntBASIC20.59■□□□□ 0.89
MTHFRP42898 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.59■□□□□ 0.89
MTHFRP42898 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 AC116351.2-201ENST00000606540 1585 ntBASIC20.59■□□□□ 0.89
MTHFRP42898 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MTHFRP42898 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MTHFRP42898 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MTHFRP42898 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MTHFRP42898 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
MTHFRP42898 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
MTHFRP42898 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.58■□□□□ 0.89
MTHFRP42898 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
MTHFRP42898 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.58■□□□□ 0.89
MTHFRP42898 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 CCR12P-201ENST00000446203 998 ntBASIC20.58■□□□□ 0.89
MTHFRP42898 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.58■□□□□ 0.89
MTHFRP42898 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.58■□□□□ 0.89
MTHFRP42898 AC091390.4-202ENST00000476426 537 ntBASIC20.58■□□□□ 0.89
MTHFRP42898 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.58■□□□□ 0.89
MTHFRP42898 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.58■□□□□ 0.89
MTHFRP42898 MYC-208ENST00000641036 567 ntBASIC20.58■□□□□ 0.89
MTHFRP42898 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MTHFRP42898 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.58■□□□□ 0.89
MTHFRP42898 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.58■□□□□ 0.88
MTHFRP42898 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 SLC25A24-204ENST00000569674 2357 ntBASIC20.58■□□□□ 0.88
MTHFRP42898 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
MTHFRP42898 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MTHFRP42898 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
MTHFRP42898 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.57■□□□□ 0.88
MTHFRP42898 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.57■□□□□ 0.88
MTHFRP42898 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
MTHFRP42898 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.57■□□□□ 0.88
MTHFRP42898 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.57■□□□□ 0.88
MTHFRP42898 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms