Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AP002982.1-201ENST00000492365 877 ntBASIC18.69■□□□□ 0.58
RORAP35398 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.69■□□□□ 0.58
RORAP35398 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.69■□□□□ 0.58
RORAP35398 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.69■□□□□ 0.58
RORAP35398 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RORAP35398 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.69■□□□□ 0.58
RORAP35398 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.69■□□□□ 0.58
RORAP35398 AC092667.1-201ENST00000434301 2586 ntBASIC18.69■□□□□ 0.58
RORAP35398 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 AP006587.1-201ENST00000534129 1502 ntBASIC18.69■□□□□ 0.58
RORAP35398 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.68■□□□□ 0.58
RORAP35398 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
RORAP35398 TFP1-202ENST00000475455 1573 ntBASIC18.68■□□□□ 0.58
RORAP35398 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.68■□□□□ 0.58
RORAP35398 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RORAP35398 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RORAP35398 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 AL355355.2-201ENST00000442321 338 ntBASIC18.68■□□□□ 0.58
RORAP35398 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RORAP35398 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RORAP35398 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RORAP35398 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RORAP35398 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RORAP35398 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.68■□□□□ 0.58
RORAP35398 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
RORAP35398 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.67■□□□□ 0.58
RORAP35398 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.67■□□□□ 0.58
RORAP35398 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.67■□□□□ 0.58
RORAP35398 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RORAP35398 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.67■□□□□ 0.58
RORAP35398 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.67■□□□□ 0.58
RORAP35398 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.67■□□□□ 0.58
RORAP35398 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.67■□□□□ 0.58
RORAP35398 LINC01023-201ENST00000606054 436 ntBASIC18.67■□□□□ 0.58
RORAP35398 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RORAP35398 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RORAP35398 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RORAP35398 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RORAP35398 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RORAP35398 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.66■□□□□ 0.58
RORAP35398 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
RORAP35398 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 AC018553.1-201ENST00000616682 1458 ntBASIC18.66■□□□□ 0.58
RORAP35398 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 AC087499.1-201ENST00000418141 1075 ntBASIC18.66■□□□□ 0.58
RORAP35398 NIFKP9-201ENST00000419265 221 ntBASIC18.66■□□□□ 0.58
RORAP35398 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.66■□□□□ 0.58
RORAP35398 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 SMG8-203ENST00000578922 2178 ntBASIC18.66■□□□□ 0.58
RORAP35398 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RORAP35398 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RORAP35398 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms