Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.69■□□□□ 0.58
CTSBP07858 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.69■□□□□ 0.58
CTSBP07858 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CTSBP07858 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CTSBP07858 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSBP07858 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSBP07858 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.69■□□□□ 0.58
CTSBP07858 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.69■□□□□ 0.58
CTSBP07858 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CTSBP07858 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.69■□□□□ 0.58
CTSBP07858 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CTSBP07858 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSBP07858 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSBP07858 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSBP07858 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 TMEM179-206ENST00000616017 1645 ntBASIC18.68■□□□□ 0.58
CTSBP07858 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSBP07858 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CTSBP07858 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 AL355075.4-201ENST00000554988 638 ntBASIC18.68■□□□□ 0.58
CTSBP07858 C1QL1P1-201ENST00000568105 661 ntBASIC18.68■□□□□ 0.58
CTSBP07858 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.68■□□□□ 0.58
CTSBP07858 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.68■□□□□ 0.58
CTSBP07858 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CTSBP07858 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CTSBP07858 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CTSBP07858 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CTSBP07858 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CTSBP07858 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSBP07858 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSBP07858 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSBP07858 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 AP002982.1-201ENST00000492365 877 ntBASIC18.67■□□□□ 0.58
CTSBP07858 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSBP07858 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.67■□□□□ 0.58
CTSBP07858 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CTSBP07858 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSBP07858 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CTSBP07858 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.67■□□□□ 0.58
CTSBP07858 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.66■□□□□ 0.58
CTSBP07858 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.66■□□□□ 0.58
CTSBP07858 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.66■□□□□ 0.58
CTSBP07858 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.66■□□□□ 0.58
CTSBP07858 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 AC073195.1-201ENST00000607241 877 ntBASIC18.66■□□□□ 0.58
CTSBP07858 AP001412.1-201ENST00000608405 714 ntBASIC18.66■□□□□ 0.58
CTSBP07858 AC026471.5-201ENST00000615068 467 ntBASIC18.66■□□□□ 0.58
CTSBP07858 CR392000.1-201ENST00000624770 1228 ntBASIC18.66■□□□□ 0.58
CTSBP07858 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 AP001271.2-201ENST00000624018 1556 ntBASIC18.66■□□□□ 0.58
CTSBP07858 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CTSBP07858 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.66■□□□□ 0.58
CTSBP07858 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CTSBP07858 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CTSBP07858 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.65■□□□□ 0.58
CTSBP07858 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.65■□□□□ 0.58
CTSBP07858 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CTSBP07858 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms