Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CGB1A6NKQ9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 AC005332.7-201ENST00000614046 2005 ntBASIC15.72■□□□□ 0.11
CGB1A6NKQ9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 BX276092.2-201ENST00000417668 665 ntBASIC15.72■□□□□ 0.11
CGB1A6NKQ9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CGB1A6NKQ9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CGB1A6NKQ9 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.71■□□□□ 0.1
CGB1A6NKQ9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CGB1A6NKQ9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CGB1A6NKQ9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms