Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 AL121672.3-201ENST00000608644 468 ntBASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TMEM88BA6NKF7 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEM88BA6NKF7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC23■■□□□ 1.27
TMEM88BA6NKF7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM88BA6NKF7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TMEM88BA6NKF7 KRT18P13-201ENST00000400056 1290 ntBASIC23■■□□□ 1.27
TMEM88BA6NKF7 AC079781.3-201ENST00000449110 356 ntBASIC23■■□□□ 1.27
TMEM88BA6NKF7 BX276092.5-203ENST00000456199 560 ntBASIC23■■□□□ 1.27
TMEM88BA6NKF7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 AL671883.3-201ENST00000603274 991 ntBASIC23■■□□□ 1.27
TMEM88BA6NKF7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
TMEM88BA6NKF7 AC016734.2-201ENST00000624325 1377 ntBASIC23■■□□□ 1.27
TMEM88BA6NKF7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 HBZP1-201ENST00000354915 429 ntBASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 AC106795.1-205ENST00000512851 1056 ntBASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.99■■□□□ 1.27
TMEM88BA6NKF7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TMEM88BA6NKF7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 TSPY19P-201ENST00000418461 509 ntBASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 TSPY18P-201ENST00000441642 509 ntBASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 AP002383.4-201ENST00000442518 975 ntBASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 SLC25A6P4-201ENST00000586535 553 ntBASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 AL732292.2-201ENST00000609649 430 ntBASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
TMEM88BA6NKF7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AL662844.1-201ENST00000546340 181 ntBASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AC011498.5-201ENST00000592027 486 ntBASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 KRT18P1-202ENST00000452408 1331 ntBASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AC018553.1-201ENST00000616682 1458 ntBASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 BX119927.1-201ENST00000636596 1552 ntBASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TMEM88BA6NKF7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms