Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL445665.1-202ENST00000452436 324 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 MIR3614-201ENST00000581261 86 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC022960.2-201ENST00000616300 666 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL355974.3-201ENST00000617383 467 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC093671.1-201ENST00000624981 2929 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 AL161756.3-201ENST00000641216 2071 ntBASIC6.26□□□□□ -1.41
SNX9Q9Y5X1 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MFSD8-219ENST00000641228 2559 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MIR375-201ENST00000362103 64 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 RNA5SP122-201ENST00000384457 108 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL050305.1-201ENST00000399993 1230 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AK4P4-201ENST00000419465 646 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MTND6P12-201ENST00000428247 522 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AP000926.3-201ENST00000497201 299 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC023389.2-201ENST00000580031 955 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC241377.1-201ENST00000619797 406 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC026124.2-201ENST00000621847 656 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MSL3P1-202ENST00000440028 1468 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AP004607.3-201ENST00000530354 3915 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC015689.2-201ENST00000528172 1738 ntBASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.25□□□□□ -1.41
SNX9Q9Y5X1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 SNORD1C-201ENST00000363315 78 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AL031985.1-201ENST00000392713 418 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 RPL23AP17-201ENST00000401064 499 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 SETP9-201ENST00000423837 832 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 MRPS21P2-201ENST00000424704 264 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 BTBD7P2-201ENST00000441962 620 ntBASIC6.24□□□□□ -1.41
SNX9Q9Y5X1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms