Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 IPPKP1-201ENST00000422501 768 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL157884.1-201ENST00000424561 454 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC092865.3-201ENST00000425390 1026 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 DSTNP5-201ENST00000427921 523 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 RPSAP65-201ENST00000429660 595 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 RPL5P7-201ENST00000444235 813 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 HMGB1P7-201ENST00000450921 612 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC068587.2-201ENST00000478386 781 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC116562.1-201ENST00000485355 781 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC018645.1-201ENST00000505003 109 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 SUMO2P5-201ENST00000506790 245 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 Y_RNA.717-201ENST00000517106 92 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 NPIPB14P-203ENST00000532298 987 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC002519.2-203ENST00000567043 837 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MTATP6P24-201ENST00000576835 677 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CBX3P2-202ENST00000583365 535 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 PRELID3BP3-201ENST00000584963 545 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL512427.1-201ENST00000618593 349 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC026124.2-201ENST00000621847 656 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CUBNP3-201ENST00000457461 1784 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AC011369.2-201ENST00000624423 1567 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 MTCO1P28-201ENST00000574177 1528 ntBASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHB1Q9Y5F3 AL353743.3-201ENST00000442109 1468 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 MTND5P11-201ENST00000511037 1812 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC022034.1-201ENST00000512867 2156 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 RNA5SP478-201ENST00000364657 115 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 OR13C3-201ENST00000374781 1108 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 RN7SKP281-201ENST00000410472 352 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 UBE2V1P14-201ENST00000415815 558 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 NENFP1-201ENST00000419476 466 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 OSTCP4-201ENST00000424397 449 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC092447.2-201ENST00000435487 669 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC044797.1-201ENST00000445744 679 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 GM2AP2-201ENST00000491764 562 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC104109.1-201ENST00000498563 436 ntBASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.34□□□□□ -1.39
PCDHB1Q9Y5F3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms