Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PTCD2P2-201ENST00000415579 1095 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 REREP1Y-201ENST00000422655 198 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 REREP2Y-201ENST00000439103 200 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 RPSAP39-201ENST00000467439 883 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 RN7SL284P-201ENST00000498823 275 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC008629.2-201ENST00000503783 483 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 SNORA70.20-201ENST00000516848 126 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 CYCSP22-201ENST00000517555 339 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC006530.1-201ENST00000555980 571 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AL356801.1-201ENST00000559320 294 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 MIR193BHG-214ENST00000641765 509 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 AC007159.1-201ENST00000566529 4706 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 PDZK1P1-202ENST00000425209 1350 ntBASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.42□□□□□ -1.54
NPIPA1Q9UND3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 RARSP1-201ENST00000542842 1418 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 THAP12P9-201ENST00000503971 2360 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 ZNF101P1-201ENST00000435701 1720 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 SNORA11B-201ENST00000408175 129 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 NMD3P2-201ENST00000421815 761 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 H3F3BP1-201ENST00000440551 403 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AL136038.1-201ENST00000497246 351 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC109481.1-201ENST00000509173 282 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC022404.1-201ENST00000555320 273 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC091078.2-201ENST00000557145 559 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC016839.1-201ENST00000578162 867 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AP001496.3-201ENST00000580230 913 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LSM1P2-201ENST00000604911 322 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AL031658.2-201ENST00000616850 651 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 MIR6826-201ENST00000617808 98 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 AC073365.1-203ENST00000641055 1992 ntBASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NPIPA1Q9UND3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms