Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR6721-201ENST00000617181 87 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 AC010266.2-201ENST00000564741 3255 ntBASIC5.35□□□□□ -1.55
VAPAQ9P0L0 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
VAPAQ9P0L0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC092681.1-201ENST00000297369 291 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RN7SKP69-201ENST00000365390 305 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 PNKDP1-201ENST00000435914 430 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 NANOGP9-201ENST00000439890 892 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RPL5P25-201ENST00000441148 775 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RBMY2AP-201ENST00000445405 1157 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RBMY2CP-201ENST00000448575 1157 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RBMY2DP-202ENST00000448881 1157 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RBMY2BP-202ENST00000451071 1156 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 ATP5LP5-201ENST00000483050 299 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 RN7SL57P-201ENST00000493687 290 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 IGLV3-24-201ENST00000517477 197 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC002519.2-203ENST00000567043 837 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 OR1E3-201ENST00000575608 948 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC090236.2-201ENST00000587933 1101 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC124916.2-201ENST00000604416 224 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC092266.1-201ENST00000610958 165 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC022919.1-201ENST00000624979 626 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC111152.1-202ENST00000635848 339 ntBASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.34□□□□□ -1.55
VAPAQ9P0L0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.34□□□□□ -1.56
VAPAQ9P0L0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
VAPAQ9P0L0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 PDZK1P1-202ENST00000425209 1350 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC079097.1-201ENST00000512187 1399 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 SEPT7P2-202ENST00000398921 823 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 VTI1BP4-201ENST00000427516 527 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 CFL1P4-201ENST00000451536 498 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 NXT1P1-201ENST00000458481 316 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 RN7SL570P-201ENST00000484405 292 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 RPL32P33-201ENST00000487023 394 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 RN7SL193P-201ENST00000491708 276 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 SETP21-201ENST00000514799 892 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.33□□□□□ -1.56
VAPAQ9P0L0 WBP1LP3-201ENST00000523033 208 ntBASIC5.33□□□□□ -1.56
VAPAQ9P0L0 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms