Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RLIMP2-201ENST00000427891 1563 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL080312.1-201ENST00000256654 824 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RNA5SP85-201ENST00000365378 119 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RNU1-136P-201ENST00000384181 164 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 MIR1266-201ENST00000408125 84 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 UBTFL2-201ENST00000411859 1191 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RAB9AP4-201ENST00000415230 609 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RPL35AP31-201ENST00000418340 337 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 PSMD10P2-201ENST00000432890 672 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC234771.4-201ENST00000441416 730 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF619P1-201ENST00000446539 752 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 MORF4L2P1-201ENST00000503761 858 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC134698.1-201ENST00000511619 643 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 IGHV7-34-1-201ENST00000519200 350 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 ASB8-202ENST00000535055 657 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC025283.1-201ENST00000572039 734 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 MED31-202ENST00000574128 619 ntTSL 3 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RN7SL32P-201ENST00000580514 281 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL589765.6-201ENST00000601909 549 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AP005212.4-201ENST00000614206 710 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 RBMY1HP-201ENST00000382759 1389 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 MTCO1P22-201ENST00000604619 1360 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 TCP11X1-202ENST00000622971 1372 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 PHACTR2P1-201ENST00000605639 1414 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AL606537.1-201ENST00000607258 2011 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AP004607.3-201ENST00000530354 3915 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 AC003973.3-201ENST00000624863 2822 ntBASIC3.85□□□□□ -1.79
SND1-IT1Q9HBX3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 CPS1-IT1-201ENST00000628368 2306 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 OR13C3-201ENST00000374781 1108 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 MIR138-2-201ENST00000384916 84 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 U3.28-201ENST00000391249 210 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 RNU2-18P-201ENST00000411224 162 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 AC009784.1-201ENST00000426484 460 ntBASIC3.84□□□□□ -1.79
SND1-IT1Q9HBX3 AC097359.1-201ENST00000447946 463 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms