Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AL049767.1-202ENST00000637826 242 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC137056.2-201ENST00000624055 1958 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 AC027088.4-201ENST00000611559 1947 ntBASIC6.86□□□□□ -1.31
UPF3BQ9BZI7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC025470.1-201ENST00000510053 2032 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 MRPL53P1-201ENST00000414323 319 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC073072.2-201ENST00000447425 348 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC021146.10-201ENST00000515628 706 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC139365.2-201ENST00000517972 253 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ZNF322P1-201ENST00000568013 1209 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC090236.2-201ENST00000587933 1101 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AC245014.3-201ENST00000618589 347 ntBASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
UPF3BQ9BZI7 AL158152.1-201ENST00000602652 1435 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AP000432.2-201ENST00000624164 2048 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC004656.1-201ENST00000568479 4951 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 CASC19-238ENST00000641523 1558 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RNA5SP273-201ENST00000362484 113 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 MIR130A-201ENST00000385274 89 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RN7SKP278-201ENST00000410504 342 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 BX284632.2-201ENST00000421091 399 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL512605.1-202ENST00000441919 381 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL359955.2-201ENST00000445380 353 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RPS23P9-201ENST00000448848 438 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 CFL1P4-201ENST00000451536 498 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ACA64.1-201ENST00000459171 127 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RN7SL717P-201ENST00000478343 297 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RPS23P1-201ENST00000491662 432 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 RN7SL57P-201ENST00000493687 290 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 IGLV2-28-201ENST00000520681 304 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AL353729.2-201ENST00000605859 1249 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 SDR42E1P1-201ENST00000611327 477 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 MIR6793-201ENST00000612376 63 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AP001153.1-201ENST00000641024 338 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC020656.2-201ENST00000613291 5309 ntBASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
UPF3BQ9BZI7 AC140134.1-201ENST00000511830 3544 ntBASIC6.84□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms