Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 RNU6-152P-201ENST00000384037 107 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 GGA1-205ENST00000405147 575 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 RN7SKP166-201ENST00000410812 305 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AL121878.1-201ENST00000418638 859 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 HMGN2P27-201ENST00000427352 270 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 GAPDHP19-201ENST00000431768 1005 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AL022324.2-201ENST00000434827 780 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 MRPS33P4-201ENST00000434892 317 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AL606490.8-201ENST00000441624 319 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VGLL1Q99990 NPM1P19-201ENST00000450070 712 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 OR52Y1P-201ENST00000452418 828 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 OSTCP1-201ENST00000455507 450 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 RARRES2P3-201ENST00000457739 473 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 RN7SL72P-201ENST00000460697 269 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC015524.1-201ENST00000491585 472 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 RNA5SP96-201ENST00000516041 107 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 snoU109.5-201ENST00000516231 132 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC138832.1-201ENST00000522871 556 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC025283.1-201ENST00000572039 734 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC024267.2-201ENST00000582737 417 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AL671309.1-201ENST00000603750 544 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 uc_338.26-201ENST00000612659 160 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 GAPDHP41-201ENST00000613707 975 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.54□□□□□ -1.68
VGLL1Q99990 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 AL049777.1-201ENST00000622740 518 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 AC069542.2-201ENST00000624816 216 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.54□□□□□ -1.68
VGLL1Q99990 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 AC138907.8-201ENST00000623981 2256 ntBASIC4.54□□□□□ -1.68
VGLL1Q99990 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
VGLL1Q99990 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VGLL1Q99990 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VGLL1Q99990 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VGLL1Q99990 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VGLL1Q99990 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VGLL1Q99990 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.53□□□□□ -1.68
VGLL1Q99990 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VGLL1Q99990 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 MTND4P9-201ENST00000507819 1346 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 RPL11P4-201ENST00000332269 436 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 RNA5SP187-201ENST00000384400 119 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 YWHAZP4-201ENST00000392459 708 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 AL358178.1-201ENST00000407698 397 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 AL360013.1-201ENST00000419031 858 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VGLL1Q99990 AC073464.3-201ENST00000422564 712 ntBASIC4.53□□□□□ -1.68
VGLL1Q99990 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.53□□□□□ -1.68
VGLL1Q99990 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms