Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RPRD1AQ96P16 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC021876.1-201ENST00000425959 359 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC127526.2-201ENST00000426436 775 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 MTND6P12-201ENST00000428247 522 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 BX119321.1-201ENST00000428912 797 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 RPL31P15-201ENST00000449770 338 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC022215.1-201ENST00000481770 362 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 RNU6-1334P-201ENST00000516032 105 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 SCARNA6.1-201ENST00000516989 238 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC022919.1-201ENST00000624979 626 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 AC117409.1-201ENST00000470499 1310 ntBASIC5.97□□□□□ -1.45
RPRD1AQ96P16 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RPRD1AQ96P16 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RPRD1AQ96P16 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RPRD1AQ96P16 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
RPRD1AQ96P16 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.96□□□□□ -1.45
RPRD1AQ96P16 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
RPRD1AQ96P16 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RN7SKP292-201ENST00000365522 317 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AL031985.1-201ENST00000392713 418 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 MGAT2P2-201ENST00000427194 797 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 HMGB3P24-201ENST00000433260 622 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AL358876.1-201ENST00000453364 1075 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RPS17P15-201ENST00000475609 349 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 MTATP6P1-201ENST00000514057 681 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC078899.1-201ENST00000521432 1185 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 MIR3614-201ENST00000581261 86 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RN7SL544P-201ENST00000617232 284 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RN7SL763P-201ENST00000620922 284 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC026124.2-201ENST00000621847 656 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC087565.3-203ENST00000641018 837 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 MIR193BHG-214ENST00000641765 509 ntBASIC5.96□□□□□ -1.46
RPRD1AQ96P16 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.96□□□□□ -1.46
RPRD1AQ96P16 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RPRD1AQ96P16 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms