Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC093716.1-201ENST00000435923 377 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 TRBV5-2-201ENST00000489095 273 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 CCDC11P1-201ENST00000503137 1162 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 snoU109.5-201ENST00000516231 132 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC084759.1-201ENST00000561168 290 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 SULT1C2P2-201ENST00000562517 294 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC006363.1-201ENST00000603806 463 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC012368.3-201ENST00000604190 219 ntBASIC5.45□□□□□ -1.54
PTP4A1Q93096 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.45□□□□□ -1.54
PTP4A1Q93096 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTP4A1Q93096 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC005224.3-201ENST00000584683 2140 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 RNA5SP453-201ENST00000362503 119 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 RNA5SP346-201ENST00000363541 121 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 DHFRP5-201ENST00000406944 564 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC245096.1-201ENST00000413104 546 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 NENFP1-201ENST00000419476 466 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 RNF19BPX-201ENST00000426224 625 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC073410.1-201ENST00000435125 589 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC007383.1-201ENST00000445875 636 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 HIGD1AP16-201ENST00000450986 258 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC073476.1-201ENST00000452854 407 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 OSTCP1-201ENST00000455507 450 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 IGHV3-63-201ENST00000518422 341 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 LINC01613-201ENST00000561476 2780 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC119403.2-201ENST00000590960 598 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 MTCO2P22-201ENST00000603246 681 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 AL121890.2-201ENST00000617644 465 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AL603750.1-201ENST00000624216 1717 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 OR9K1P-202ENST00000641111 3217 ntBASIC5.44□□□□□ -1.54
PTP4A1Q93096 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTP4A1Q93096 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.44□□□□□ -1.54
PTP4A1Q93096 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.43□□□□□ -1.54
PTP4A1Q93096 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTP4A1Q93096 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms