Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 MIR4776-2-201ENST00000580204 80 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AC008507.3-201ENST00000585753 472 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AC107993.1-201ENST00000591343 684 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AL513327.3-201ENST00000602618 469 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 MIR6793-201ENST00000612376 63 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AL158152.1-201ENST00000602652 1435 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 AC027088.4-201ENST00000611559 1947 ntBASIC4.78□□□□□ -1.64
ZNF439Q8NDP4 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 U3.10-201ENST00000364459 214 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 BX284632.2-201ENST00000421091 399 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 TUBB4BP6-201ENST00000437576 479 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ATP5LP2-201ENST00000440646 311 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AL512605.1-202ENST00000441919 381 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC023141.8-201ENST00000442554 208 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AL359955.2-201ENST00000445380 353 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 RN7SL72P-201ENST00000460697 269 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 RN7SL193P-201ENST00000491708 276 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 EIF4E2P2-201ENST00000492033 736 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC122718.2-201ENST00000505325 591 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 SNORA70.11-201ENST00000515987 138 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 SNORA70.13-201ENST00000516116 138 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC006512.2-201ENST00000543250 486 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 CYCSP38-201ENST00000559840 322 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC002310.3-201ENST00000569728 723 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 OR51C1P-201ENST00000608504 942 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AP001052.1-201ENST00000626421 99 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC099654.6-201ENST00000636487 512 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AL596275.2-207ENST00000641188 675 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 PARP4P2-201ENST00000446672 3326 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
ZNF439Q8NDP4 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ZNF439Q8NDP4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms