Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
VPS8Q8N3P4 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 RNA5SP319-201ENST00000362768 119 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 SRSF1P1-201ENST00000424058 520 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 RIMKLBP2-201ENST00000424737 654 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 LINC02210-201ENST00000444561 288 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 PABPC1P6-201ENST00000445594 1829 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 RN7SL727P-201ENST00000482164 296 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 OR7E18P-201ENST00000592589 702 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 AL355488.2-201ENST00000609909 2850 ntBASIC8.67□□□□□ -1.02
VPS8Q8N3P4 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
VPS8Q8N3P4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AC079753.1-201ENST00000623243 3868 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AL009179.1-201ENST00000406085 265 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AL390774.1-201ENST00000411924 246 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 RPL35AP24-201ENST00000413846 330 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 EIF3LP3-201ENST00000495197 822 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 H3F3BP2-201ENST00000583907 357 ntBASIC8.66□□□□□ -1.02
VPS8Q8N3P4 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 DMD-202ENST00000343523 5623 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
VPS8Q8N3P4 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 Z83820.1-201ENST00000456978 1499 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 AL672138.1-201ENST00000450604 1015 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 RPL7P6-201ENST00000480903 738 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 OR11H3P-201ENST00000554547 982 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 AC135068.5-201ENST00000624197 983 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 CASC19-264ENST00000641912 1184 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 AC034229.2-201ENST00000566945 2508 ntBASIC8.65□□□□□ -1.02
VPS8Q8N3P4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
VPS8Q8N3P4 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS8Q8N3P4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC8.65□□□□□ -1.03
VPS8Q8N3P4 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
VPS8Q8N3P4 PRNCR1-201ENST00000635449 12727 ntBASIC8.65□□□□□ -1.03
VPS8Q8N3P4 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
VPS8Q8N3P4 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
VPS8Q8N3P4 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 RN7SKP6-201ENST00000364795 319 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 RNU1-77P-201ENST00000390868 162 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 CYCSP6-201ENST00000434498 302 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AC105399.1-202ENST00000447303 205 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 RN7SL214P-201ENST00000487317 265 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 FKBP1AP1-201ENST00000594588 318 ntBASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.64□□□□□ -1.03
VPS8Q8N3P4 AC004808.2-201ENST00000627965 773 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms