Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC006213.6-201ENST00000623722 4179 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 GAPDHP24-201ENST00000328713 983 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 RNA5SP478-201ENST00000364657 115 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 HMGB1P20-201ENST00000402555 677 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 BMS1P17-202ENST00000416720 316 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 MTND2P11-201ENST00000423638 648 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL445528.1-201ENST00000426330 420 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC127526.2-201ENST00000426436 775 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 MTATP6P11-201ENST00000428071 670 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC126120.1-201ENST00000431082 470 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 RAB9AP5-201ENST00000437794 597 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 RAB9AP2-201ENST00000443911 597 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC023245.1-201ENST00000468501 517 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC114728.1-201ENST00000488289 483 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 RPS26P24-201ENST00000497656 331 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 OR5M14P-201ENST00000506803 618 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC109481.1-201ENST00000509173 282 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL121579.2-201ENST00000555466 590 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL731537.2-201ENST00000561565 951 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC027281.1-201ENST00000574178 758 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 MAPK10-350ENST00000641777 965 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AL022323.4-201ENST00000623980 13120 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 PDZK1P1-202ENST00000425209 1350 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HERC6Q8IVU3 AC087565.3-202ENST00000642085 1603 ntBASIC6.54□□□□□ -1.36
HERC6Q8IVU3 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC235565.1-201ENST00000456962 1325 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 OR11H13P-201ENST00000359695 979 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 RNA5SP443-201ENST00000363083 132 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 RNA5SP394-201ENST00000364216 119 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AL451142.1-201ENST00000375867 775 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 SNORA70-201ENST00000384436 135 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC017019.1-201ENST00000426129 261 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 SPRYD7P1-201ENST00000443861 570 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AL500527.1-201ENST00000448532 255 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 RPS23P1-201ENST00000491662 432 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 RPL17P2-201ENST00000491913 451 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 NENFP3-201ENST00000503735 313 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 BX510359.5-201ENST00000515651 304 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 SEC11B-201ENST00000518383 499 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 QTRT1P1-201ENST00000604344 1078 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC141002.1-201ENST00000607025 279 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AL021918.2-201ENST00000613415 194 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AL162233.1-201ENST00000620014 944 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC012254.5-201ENST00000623573 478 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 MAPK10-287ENST00000641217 3037 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AL662795.2-201ENST00000624252 3706 ntBASIC6.53□□□□□ -1.36
HERC6Q8IVU3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
HERC6Q8IVU3 AC011504.1-201ENST00000623331 4103 ntBASIC6.52□□□□□ -1.36
HERC6Q8IVU3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
HERC6Q8IVU3 AC024587.1-201ENST00000505925 2157 ntBASIC6.52□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms