Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 CFL1P4-201ENST00000451536 498 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC002553.2-201ENST00000453217 340 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC067805.1-201ENST00000559344 470 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 FAM106CP-201ENST00000582212 507 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AL645933.2-201ENST00000606743 1207 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC092266.1-201ENST00000610958 165 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC008833.1-201ENST00000611633 691 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC096861.1-201ENST00000616652 240 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 SAMMSON-213ENST00000641336 1521 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC019072.1-201ENST00000604535 1551 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 AC024587.1-201ENST00000505925 2157 ntBASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
NUP54Q7Z3B4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 COX6B1P3-201ENST00000312310 260 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RNA5SP375-201ENST00000362975 119 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 SNORA51.9-201ENST00000384295 124 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CXADRP1-201ENST00000398098 1095 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 DHFRP5-201ENST00000406944 564 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC245096.1-201ENST00000413104 546 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC093084.1-201ENST00000424233 687 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC069154.1-201ENST00000432914 542 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC112187.1-201ENST00000455837 479 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RPL31P53-201ENST00000457065 348 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL445687.2-201ENST00000458156 728 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC092865.4-201ENST00000477936 615 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 RBBP4P1-201ENST00000502424 1276 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC008945.1-201ENST00000505144 499 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 OR56A7P-201ENST00000524865 941 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AL049779.3-201ENST00000557141 606 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 CD24P2-201ENST00000565486 219 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 GLYATL1P2-202ENST00000588046 902 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 FAM60CP-201ENST00000591086 664 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC012254.3-201ENST00000591183 2117 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC020915.5-201ENST00000596836 964 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC073333.2-201ENST00000603589 769 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 AC004890.3-201ENST00000605566 1095 ntBASIC5.61□□□□□ -1.51
NUP54Q7Z3B4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms