Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL354941.1-201ENST00000438600 464 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX4Q06945 GAPDHP37-201ENST00000442317 968 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 CDC27P1-201ENST00000445384 715 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 SEPT14P24-201ENST00000447236 180 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL445991.1-201ENST00000450381 475 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 AC244505.3-201ENST00000454598 187 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 SUMO2P2-201ENST00000456482 255 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 RPL30P6-201ENST00000475925 342 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC7.26□□□□□ -1.25
SOX4Q06945 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 FGB-207ENST00000509493 1164 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 AP001000.1-201ENST00000526843 742 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 AP002963.1-201ENST00000530590 184 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL049830.4-201ENST00000555149 351 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AC245505.1-201ENST00000556398 224 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 AP002884.5-201ENST00000595053 1132 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AC008083.4-201ENST00000615076 444 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 AL359757.1-201ENST00000623176 255 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL355974.1-201ENST00000618896 1708 ntBASIC7.26□□□□□ -1.25
SOX4Q06945 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
SOX4Q06945 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.26□□□□□ -1.25
SOX4Q06945 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
SOX4Q06945 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC7.26□□□□□ -1.25
SOX4Q06945 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SOX4Q06945 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SOX4Q06945 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.25□□□□□ -1.25
SOX4Q06945 RPL24P4-201ENST00000326586 421 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 Y_RNA.248-201ENST00000364501 109 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 RNU1-55P-201ENST00000365510 158 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 TRAV35-201ENST00000390462 330 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 U3.28-201ENST00000391249 210 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AL031577.2-201ENST00000404133 280 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 AC006960.1-201ENST00000419980 153 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 RPL7AP51-201ENST00000422016 760 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
SOX4Q06945 MOB1AP1-201ENST00000430903 535 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AC092106.2-201ENST00000436597 487 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AC096632.2-201ENST00000438139 1239 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AC098614.3-201ENST00000438957 440 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.25□□□□□ -1.25
SOX4Q06945 AL627224.1-201ENST00000448334 444 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 RPL7P32-201ENST00000457119 744 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 RPL7AP23-201ENST00000482625 776 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 AL117692.1-201ENST00000494283 713 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 OR52H2P-201ENST00000514607 902 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 HIGD1AP10-201ENST00000527837 282 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 AP000873.5-201ENST00000533906 236 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
SOX4Q06945 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 SNORA70D-201ENST00000578836 135 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 PRELID3BP3-201ENST00000584963 545 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 ELOCP28-201ENST00000590044 317 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC7.25□□□□□ -1.25
SOX4Q06945 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.25□□□□□ -1.25
SOX4Q06945 AC091133.5-201ENST00000603088 301 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 MTCYBP22-201ENST00000603788 447 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.25□□□□□ -1.25
SOX4Q06945 AC126118.1-201ENST00000607744 628 ntBASIC7.25□□□□□ -1.25
SOX4Q06945 SNORD91A-202ENST00000609620 191 ntBASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms