Protein–RNA interactions for Protein: Q05682

CALD1, Caldesmon, humanhuman

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1Q05682 RPL11P3-201ENST00000395256 523 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 SMC4P1-201ENST00000414479 527 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.55□□□□□ -1.2
CALD1Q05682 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.55□□□□□ -1.2
CALD1Q05682 NPM1P25-201ENST00000429734 854 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 USP24P1-201ENST00000433802 779 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 RPL23AP19-201ENST00000436229 369 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 OR7E116P-201ENST00000448529 957 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 FRG2FP-204ENST00000453982 852 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 AC090602.1-201ENST00000469695 252 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 AC007998.1-201ENST00000474156 672 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.55□□□□□ -1.2
CALD1Q05682 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.55□□□□□ -1.2
CALD1Q05682 IGKV2-4-201ENST00000523070 340 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 TRIM51DP-201ENST00000529746 596 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.55□□□□□ -1.2
CALD1Q05682 RN7SL544P-201ENST00000617232 284 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 RN7SL763P-201ENST00000620922 284 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 AP001962.1-201ENST00000624114 559 ntBASIC7.55□□□□□ -1.2
CALD1Q05682 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.55□□□□□ -1.2
CALD1Q05682 ATM-229ENST00000639953 587 ntTSL 5 BASIC7.55□□□□□ -1.2
CALD1Q05682 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CALD1Q05682 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC7.55□□□□□ -1.2
CALD1Q05682 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CALD1Q05682 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CALD1Q05682 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
CALD1Q05682 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CALD1Q05682 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CALD1Q05682 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC7.54□□□□□ -1.2
CALD1Q05682 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CALD1Q05682 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CALD1Q05682 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
CALD1Q05682 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 MIR133A2-201ENST00000347538 102 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CALD1Q05682 AL357752.1-201ENST00000412817 349 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC7.54□□□□□ -1.2
CALD1Q05682 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.54□□□□□ -1.2
CALD1Q05682 PSMA2P2-201ENST00000504319 686 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 RNU6-964P-201ENST00000516524 69 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC7.54□□□□□ -1.2
CALD1Q05682 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 AC010809.3-201ENST00000621310 641 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CALD1Q05682 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CALD1Q05682 AP004607.3-201ENST00000530354 3915 ntBASIC7.54□□□□□ -1.2
CALD1Q05682 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CALD1Q05682 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
CALD1Q05682 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC7.54□□□□□ -1.2
CALD1Q05682 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC7.53□□□□□ -1.2
CALD1Q05682 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 AC016745.2-201ENST00000608834 3443 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
CALD1Q05682 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CALD1Q05682 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 RNA5SP510-201ENST00000364697 99 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 RPL12P16-201ENST00000431098 498 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 RPS29P14-201ENST00000431518 171 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC7.53□□□□□ -1.2
CALD1Q05682 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 snoU13.29-201ENST00000459370 104 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC090058.1-201ENST00000498788 435 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC7.53□□□□□ -1.2
CALD1Q05682 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 SNORD46.2-201ENST00000516021 102 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 SCARNA6.1-201ENST00000516989 238 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC021678.3-201ENST00000517893 476 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC139365.2-201ENST00000517972 253 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.53□□□□□ -1.2
CALD1Q05682 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 NPM1P42-201ENST00000560329 862 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.53□□□□□ -1.2
CALD1Q05682 AL513327.3-201ENST00000602618 469 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC002069.2-201ENST00000603580 883 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.53□□□□□ -1.2
CALD1Q05682 AC093388.1-201ENST00000609166 430 ntBASIC7.53□□□□□ -1.2
CALD1Q05682 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
CALD1Q05682 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.53□□□□□ -1.2
CALD1Q05682 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CALD1Q05682 AL158152.1-201ENST00000602652 1435 ntBASIC7.52□□□□□ -1.2
CALD1Q05682 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.52□□□□□ -1.2
CALD1Q05682 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
CALD1Q05682 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CALD1Q05682 AC004158.1-201ENST00000564508 4319 ntBASIC7.52□□□□□ -1.21
CALD1Q05682 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CALD1Q05682 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
CALD1Q05682 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CALD1Q05682 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms