Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC021678.3-201ENST00000517893 476 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.16□□□□□ -1.58
H3F3AP84243 IGLV3-30-201ENST00000524362 298 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.16□□□□□ -1.58
H3F3AP84243 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.16□□□□□ -1.58
H3F3AP84243 AC027243.2-201ENST00000602530 724 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 AL513327.3-201ENST00000602618 469 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 MIR6778-201ENST00000617912 73 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 AC092451.3-201ENST00000625067 1343 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
H3F3AP84243 AC140479.2-201ENST00000421567 3130 ntBASIC5.16□□□□□ -1.58
H3F3AP84243 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
H3F3AP84243 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
H3F3AP84243 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
H3F3AP84243 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.15□□□□□ -1.58
H3F3AP84243 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
H3F3AP84243 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
H3F3AP84243 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
H3F3AP84243 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
H3F3AP84243 OR52B3P-201ENST00000314715 928 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 MIR375-201ENST00000362103 64 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.15□□□□□ -1.59
H3F3AP84243 RNA5SP91-201ENST00000390902 119 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC245060.4-201ENST00000413293 1121 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC017078.1-201ENST00000416146 368 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 BX119904.3-201ENST00000428194 957 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.15□□□□□ -1.59
H3F3AP84243 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 AC084754.1-201ENST00000463466 464 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 RPSAP37-201ENST00000470913 821 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC073610.1-201ENST00000489971 396 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC009120.1-201ENST00000493458 473 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.15□□□□□ -1.59
H3F3AP84243 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC090888.3-201ENST00000558917 509 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.15□□□□□ -1.59
H3F3AP84243 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.15□□□□□ -1.59
H3F3AP84243 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 RN7SL544P-201ENST00000617232 284 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 RN7SL763P-201ENST00000620922 284 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AC069542.2-201ENST00000624816 216 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.59
H3F3AP84243 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.15□□□□□ -1.59
H3F3AP84243 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
H3F3AP84243 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 AL159987.1-201ENST00000347911 293 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 RPL11P3-201ENST00000395256 523 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 PEX12P1-201ENST00000400284 1048 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3AP84243 NIFKP3-201ENST00000417799 865 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AL354766.1-201ENST00000423396 542 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.14□□□□□ -1.59
H3F3AP84243 AL022331.1-201ENST00000429025 477 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.14□□□□□ -1.59
H3F3AP84243 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.14□□□□□ -1.59
H3F3AP84243 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.14□□□□□ -1.59
H3F3AP84243 OR7E116P-201ENST00000448529 957 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 AL445665.1-202ENST00000452436 324 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.14□□□□□ -1.59
H3F3AP84243 AC093719.1-201ENST00000480427 441 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 SNORA70.20-201ENST00000516848 126 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 SCARNA6.1-201ENST00000516989 238 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
H3F3AP84243 AP004609.2-201ENST00000532177 190 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.14□□□□□ -1.59
H3F3AP84243 DPPA2P4-201ENST00000563717 878 ntBASIC5.14□□□□□ -1.59
H3F3AP84243 AC023389.2-201ENST00000580031 955 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms