Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IGBP1P4-201ENST00000503202 879 ntBASIC3.9□□□□□ -1.79
RPL39P62891 CSNK1A1P3-201ENST00000504105 330 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC093325.1-201ENST00000508378 326 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC108103.1-201ENST00000511286 446 ntBASIC3.9□□□□□ -1.79
RPL39P62891 HMGN1P9-201ENST00000515212 298 ntBASIC3.9□□□□□ -1.79
RPL39P62891 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 IGLV3-24-201ENST00000517477 197 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 AP004607.5-201ENST00000532034 217 ntBASIC3.9□□□□□ -1.79
RPL39P62891 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 CASC22-201ENST00000569713 386 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 AC004232.2-201ENST00000574245 821 ntBASIC3.9□□□□□ -1.79
RPL39P62891 SNURF-202ENST00000577949 650 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 AC127024.5-201ENST00000580085 462 ntBASIC3.9□□□□□ -1.79
RPL39P62891 PRPF19P1-201ENST00000584766 898 ntBASIC3.9□□□□□ -1.79
RPL39P62891 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC3.9□□□□□ -1.79
RPL39P62891 AC073389.3-201ENST00000609434 935 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AL135999.3-201ENST00000610501 812 ntBASIC3.9□□□□□ -1.79
RPL39P62891 MIR6885-201ENST00000612241 66 ntBASIC3.9□□□□□ -1.79
RPL39P62891 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 MIR6736-201ENST00000616799 59 ntBASIC3.9□□□□□ -1.79
RPL39P62891 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 AL138693.1-201ENST00000622219 129 ntBASIC3.9□□□□□ -1.79
RPL39P62891 ENSA-215ENST00000638926 360 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC3.9□□□□□ -1.79
RPL39P62891 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC3.9□□□□□ -1.79
RPL39P62891 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RPL39P62891 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 TCP11X1-202ENST00000622971 1372 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 AC011755.1-201ENST00000623763 2049 ntBASIC3.89□□□□□ -1.79
RPL39P62891 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 GAPDHP24-201ENST00000328713 983 ntBASIC3.89□□□□□ -1.79
RPL39P62891 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 AC007618.1-201ENST00000366455 732 ntBASIC3.89□□□□□ -1.79
RPL39P62891 OR1L6-202ENST00000373684 1044 ntBASIC3.89□□□□□ -1.79
RPL39P62891 ZNF37CP-201ENST00000406795 241 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 AL035422.1-201ENST00000414193 397 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC3.89□□□□□ -1.79
RPL39P62891 RPL7AP49-201ENST00000429522 581 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 AL591438.1-201ENST00000433508 581 ntBASIC3.89□□□□□ -1.79
RPL39P62891 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 RPL19P16-201ENST00000433839 588 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 GAPDHP14-201ENST00000450472 937 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 RN7SL570P-201ENST00000484405 292 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC073610.1-201ENST00000489971 396 ntBASIC3.89□□□□□ -1.79
RPL39P62891 RN7SL57P-201ENST00000493687 290 ntBASIC3.89□□□□□ -1.79
RPL39P62891 MYL12BP2-201ENST00000503948 512 ntBASIC3.89□□□□□ -1.79
RPL39P62891 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 AL158068.1-201ENST00000506116 616 ntBASIC3.89□□□□□ -1.79
RPL39P62891 DUTP7-201ENST00000507982 486 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC098976.1-201ENST00000513014 541 ntBASIC3.89□□□□□ -1.79
RPL39P62891 RNA5SP441-201ENST00000516809 88 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 CDC42P3-201ENST00000518493 633 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RPL39P62891 AC006530.1-201ENST00000555980 571 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC3.89□□□□□ -1.79
RPL39P62891 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC3.89□□□□□ -1.79
RPL39P62891 MIR4776-2-201ENST00000580204 80 ntBASIC3.89□□□□□ -1.79
RPL39P62891 MIR4311-201ENST00000580794 100 ntBASIC3.89□□□□□ -1.79
RPL39P62891 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 AC009237.13-201ENST00000603193 276 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 AL049829.3-202ENST00000604278 711 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC012511.1-201ENST00000608140 449 ntBASIC3.89□□□□□ -1.79
RPL39P62891 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RPL39P62891 AC015819.1-201ENST00000613588 663 ntBASIC3.89□□□□□ -1.79
RPL39P62891 AC009120.7-201ENST00000623452 780 ntBASIC3.89□□□□□ -1.79
RPL39P62891 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
RPL39P62891 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC3.89□□□□□ -1.79
RPL39P62891 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC3.89□□□□□ -1.79
RPL39P62891 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms