Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 RPS27AP3-201ENST00000453803 454 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC079080.1-201ENST00000479841 822 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 MTCO1P31-201ENST00000506355 492 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 BTG4P1-201ENST00000510421 183 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.89□□□□□ -1.47
NR1H2P55055 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 OR8X1P-201ENST00000534542 869 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC006518.1-201ENST00000541449 943 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC005519.1-201ENST00000554490 601 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC121758.1-202ENST00000556917 658 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 AC037479.1-201ENST00000558361 625 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 MT1CP-201ENST00000567054 174 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 AC021483.2-201ENST00000567415 758 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 AC027334.1-201ENST00000603257 310 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 WBP1LP12-201ENST00000604449 331 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 KATNBL1P5-201ENST00000605015 517 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.89□□□□□ -1.47
NR1H2P55055 SNORA16A-202ENST00000628458 135 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
NR1H2P55055 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.89□□□□□ -1.47
NR1H2P55055 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 AL591135.1-201ENST00000401578 5914 ntBASIC5.89□□□□□ -1.47
NR1H2P55055 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NR1H2P55055 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 AP005435.3-201ENST00000531260 3198 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 RNA5SP321-201ENST00000362722 111 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NR1H2P55055 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 RNU6-31P-201ENST00000384388 108 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AL391422.1-201ENST00000402155 436 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 RN7SKP296-201ENST00000411185 341 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AL158827.1-201ENST00000416300 391 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 RPS7P12-201ENST00000422385 582 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 GPN3P1-201ENST00000423883 535 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 AL590128.1-201ENST00000433407 286 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC128677.1-201ENST00000436016 442 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 GAPDHP37-201ENST00000442317 968 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 TIMM8BP2-201ENST00000445940 251 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC118758.1-202ENST00000454719 225 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 HSPE1P22-201ENST00000456856 327 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC092691.2-201ENST00000461787 803 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 RN7SL170P-201ENST00000487098 295 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NR1H2P55055 AC091849.1-201ENST00000509920 121 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 CYP4F27P-201ENST00000514557 494 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC103833.1-201ENST00000517442 172 ntBASIC5.88□□□□□ -1.47
NR1H2P55055 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.88□□□□□ -1.47
NR1H2P55055 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.88□□□□□ -1.47
NR1H2P55055 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.88□□□□□ -1.47
NR1H2P55055 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms