Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF2A1P52655 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF2A1P52655 uc_338.31-201ENST00000615595 186 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 AC244517.3-201ENST00000616254 1235 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 AC005514.1-201ENST00000623521 208 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 DDX18P4-201ENST00000511690 1966 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 THAP12P9-201ENST00000503971 2360 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GTF2A1P52655 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.52□□□□□ -1.53
GTF2A1P52655 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
GTF2A1P52655 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GTF2A1P52655 GNL2P1-201ENST00000451274 2190 ntBASIC5.52□□□□□ -1.53
GTF2A1P52655 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 VN2R3P-201ENST00000422626 1412 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 OR52B1P-201ENST00000316506 909 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 RNU2-22P-201ENST00000411266 212 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC096921.1-201ENST00000411661 375 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 E2F6P2-201ENST00000420708 748 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 RNGTTP1-201ENST00000420965 728 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
GTF2A1P52655 E2F6P3-201ENST00000441743 743 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC016908.1-201ENST00000442571 1219 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AF305872.1-201ENST00000485217 471 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 RNA5SP303-201ENST00000516192 130 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC079064.1-201ENST00000528365 362 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AL121594.2-201ENST00000541658 472 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.51□□□□□ -1.53
GTF2A1P52655 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC126323.4-201ENST00000566935 234 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 LINC01396-201ENST00000609099 527 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 AL137000.1-201ENST00000610528 1244 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AL158196.1-201ENST00000616786 434 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 MIR7854-201ENST00000620068 65 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.51□□□□□ -1.53
GTF2A1P52655 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.51□□□□□ -1.53
GTF2A1P52655 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.51□□□□□ -1.53
GTF2A1P52655 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.51□□□□□ -1.53
GTF2A1P52655 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
GTF2A1P52655 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GTF2A1P52655 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AL133243.3-201ENST00000617415 3004 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 DDX18P6-201ENST00000450119 1997 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 RN7SKP224-201ENST00000364140 325 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RN7SKP191-201ENST00000364713 306 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AL139184.1-202ENST00000422303 222 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF2A1P52655 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
GTF2A1P52655 FECHP1-201ENST00000431896 1214 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 PCMTD1P3-201ENST00000451824 472 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RANP2-201ENST00000456833 229 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 OR7E22P-201ENST00000478335 1035 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RPL23AP37-201ENST00000479658 549 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC021146.10-201ENST00000515628 706 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RN7SKP242-201ENST00000515967 289 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 SLC25A51P2-201ENST00000535708 889 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.5□□□□□ -1.53
GTF2A1P52655 AC005519.1-201ENST00000554490 601 ntBASIC5.5□□□□□ -1.53
GTF2A1P52655 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC5.5□□□□□ -1.53
GTF2A1P52655 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.5□□□□□ -1.53
GTF2A1P52655 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms