Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
NEK3P51956 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NEK3P51956 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NEK3P51956 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.44□□□□□ -1.38
NEK3P51956 RPL7P58-201ENST00000402913 758 ntBASIC6.44□□□□□ -1.38
NEK3P51956 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 AL158053.1-201ENST00000441503 453 ntBASIC6.44□□□□□ -1.38
NEK3P51956 POU5F1P5-201ENST00000445059 658 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AC108751.3-201ENST00000461814 1020 ntBASIC6.44□□□□□ -1.38
NEK3P51956 RN7SL221P-201ENST00000466190 281 ntBASIC6.44□□□□□ -1.38
NEK3P51956 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 AC091874.2-201ENST00000505889 720 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AC108103.1-201ENST00000511286 446 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC011853.1-201ENST00000518911 454 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 NPIPB14P-203ENST00000532298 987 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC026826.3-201ENST00000561747 158 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.44□□□□□ -1.38
NEK3P51956 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.44□□□□□ -1.38
NEK3P51956 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NEK3P51956 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 AC010329.1-201ENST00000593903 8328 ntBASIC6.44□□□□□ -1.38
NEK3P51956 AC068870.3-201ENST00000625077 2536 ntBASIC6.44□□□□□ -1.38
NEK3P51956 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
NEK3P51956 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.44□□□□□ -1.38
NEK3P51956 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.44□□□□□ -1.38
NEK3P51956 ZNF733P-202ENST00000444809 1573 ntBASIC6.44□□□□□ -1.38
NEK3P51956 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEK3P51956 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 AC123769.1-201ENST00000530992 3192 ntBASIC6.43□□□□□ -1.38
NEK3P51956 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NEK3P51956 RNU4-31P-201ENST00000384211 141 ntBASIC6.43□□□□□ -1.38
NEK3P51956 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.43□□□□□ -1.38
NEK3P51956 RPL5P19-201ENST00000404228 893 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL139805.1-201ENST00000407837 289 ntBASIC6.43□□□□□ -1.38
NEK3P51956 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 RPS26P38-201ENST00000414476 348 ntBASIC6.43□□□□□ -1.38
NEK3P51956 RPL7AP14-201ENST00000424041 802 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.43□□□□□ -1.38
NEK3P51956 AC245884.2-201ENST00000426257 404 ntBASIC6.43□□□□□ -1.38
NEK3P51956 HSPE1P16-201ENST00000426640 348 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AC108479.1-201ENST00000431142 427 ntBASIC6.43□□□□□ -1.38
NEK3P51956 BX119904.1-201ENST00000432026 348 ntBASIC6.43□□□□□ -1.38
NEK3P51956 GAPDHP34-201ENST00000432112 823 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 PCNPP2-201ENST00000441651 455 ntBASIC6.43□□□□□ -1.38
NEK3P51956 CLIC4P1-201ENST00000453177 535 ntBASIC6.43□□□□□ -1.38
NEK3P51956 HSPE1P22-201ENST00000456856 327 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AL022319.1-201ENST00000458183 1167 ntBASIC6.43□□□□□ -1.38
NEK3P51956 RN7SL254P-201ENST00000460609 284 ntBASIC6.43□□□□□ -1.38
NEK3P51956 RN7SL643P-201ENST00000471845 291 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AC114728.1-201ENST00000488289 483 ntBASIC6.43□□□□□ -1.38
NEK3P51956 HMGN1P17-201ENST00000513734 295 ntBASIC6.43□□□□□ -1.38
NEK3P51956 ZNF519P4-201ENST00000514008 125 ntBASIC6.43□□□□□ -1.38
NEK3P51956 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NEK3P51956 AC084121.1-201ENST00000533882 835 ntBASIC6.43□□□□□ -1.38
NEK3P51956 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEK3P51956 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.43□□□□□ -1.38
NEK3P51956 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms