Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC008432.1-201ENST00000615912 1320 ntBASIC5.44□□□□□ -1.54
SOX2P48431 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX2P48431 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX2P48431 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
SOX2P48431 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
SOX2P48431 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX2P48431 AL359715.4-201ENST00000606629 1436 ntBASIC5.43□□□□□ -1.54
SOX2P48431 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 RNU6-298P-201ENST00000390888 96 ntBASIC5.43□□□□□ -1.54
SOX2P48431 ZNF602P-201ENST00000405929 924 ntBASIC5.43□□□□□ -1.54
SOX2P48431 SNORA79B-201ENST00000410557 148 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 PCNPP4-201ENST00000414817 517 ntBASIC5.43□□□□□ -1.54
SOX2P48431 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX2P48431 AC115285.1-201ENST00000424879 736 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC092865.3-201ENST00000425390 1026 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC083862.1-201ENST00000427378 1242 ntBASIC5.43□□□□□ -1.54
SOX2P48431 FO393414.1-201ENST00000428697 1184 ntBASIC5.43□□□□□ -1.54
SOX2P48431 E2F6P1-201ENST00000428850 745 ntBASIC5.43□□□□□ -1.54
SOX2P48431 MTCO1P43-201ENST00000431831 488 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL365220.1-201ENST00000432923 399 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC092447.2-201ENST00000435487 669 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX2P48431 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 E2F6P3-201ENST00000441743 743 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC016908.1-201ENST00000442571 1219 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 AC044797.1-201ENST00000445744 679 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 RARRES2P3-201ENST00000457739 473 ntBASIC5.43□□□□□ -1.54
SOX2P48431 CBX1P5-201ENST00000475330 559 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC020779.1-201ENST00000478757 796 ntBASIC5.43□□□□□ -1.54
SOX2P48431 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX2P48431 HMGB1P38-201ENST00000490557 577 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC093720.1-201ENST00000505681 714 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC093870.1-201ENST00000506837 213 ntBASIC5.43□□□□□ -1.54
SOX2P48431 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 PRELID3BP5-201ENST00000508612 460 ntBASIC5.43□□□□□ -1.54
SOX2P48431 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 AC021146.7-201ENST00000509604 775 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 C8orf44-205ENST00000521889 598 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 AP003080.1-202ENST00000526526 915 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AP001994.1-201ENST00000527539 826 ntBASIC5.43□□□□□ -1.54
SOX2P48431 RPA2P3-201ENST00000533268 770 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX2P48431 AC009729.1-201ENST00000548873 1133 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 HNRNPCP1-201ENST00000556181 766 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX2P48431 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX2P48431 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 AC005332.4-201ENST00000592752 579 ntBASIC5.43□□□□□ -1.54
SOX2P48431 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SOX2P48431 AP001267.4-201ENST00000602598 545 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL031429.2-201ENST00000602605 649 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL352984.2-202ENST00000613699 155 ntBASIC5.43□□□□□ -1.54
SOX2P48431 AL138960.1-201ENST00000613838 513 ntBASIC5.43□□□□□ -1.54
SOX2P48431 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.43□□□□□ -1.54
SOX2P48431 AP003108.4-201ENST00000623917 878 ntBASIC5.43□□□□□ -1.54
SOX2P48431 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
SOX2P48431 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX2P48431 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX2P48431 AL137141.1-201ENST00000624622 4836 ntBASIC5.43□□□□□ -1.54
SOX2P48431 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 NDFIP2-203ENST00000487865 1384 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.42□□□□□ -1.54
SOX2P48431 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SOX2P48431 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.42□□□□□ -1.54
SOX2P48431 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX2P48431 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.42□□□□□ -1.54
SOX2P48431 AC132825.1-201ENST00000463573 2247 ntBASIC5.42□□□□□ -1.54
SOX2P48431 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX2P48431 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms