Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 GNG5P2-201ENST00000372054 207 ntBASIC6.57□□□□□ -1.36
CIITAP33076 SNORA70.9-201ENST00000384370 135 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AL031985.1-201ENST00000392713 418 ntBASIC6.57□□□□□ -1.36
CIITAP33076 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.57□□□□□ -1.36
CIITAP33076 AC104843.2-201ENST00000427666 297 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AL389925.1-201ENST00000432257 728 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC073410.1-201ENST00000435125 589 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.57□□□□□ -1.36
CIITAP33076 RPSAP37-201ENST00000470913 821 ntBASIC6.57□□□□□ -1.36
CIITAP33076 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 AC009120.1-201ENST00000493458 473 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC135626.1-201ENST00000556983 435 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.57□□□□□ -1.36
CIITAP33076 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC6.57□□□□□ -1.36
CIITAP33076 AC015802.2-201ENST00000589690 189 ntBASIC6.57□□□□□ -1.36
CIITAP33076 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 BNIP3P7-201ENST00000605641 516 ntBASIC6.57□□□□□ -1.36
CIITAP33076 BX322635.1-201ENST00000605804 496 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC026790.2-201ENST00000606282 430 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC092574.1-201ENST00000609771 420 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC003001.2-201ENST00000616294 831 ntBASIC6.57□□□□□ -1.36
CIITAP33076 AC020923.1-201ENST00000624021 917 ntBASIC6.57□□□□□ -1.36
CIITAP33076 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CIITAP33076 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.57□□□□□ -1.36
CIITAP33076 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 MFSD8-239ENST00000641590 2479 ntBASIC6.57□□□□□ -1.36
CIITAP33076 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CIITAP33076 MFSD8-219ENST00000641228 2559 ntBASIC6.57□□□□□ -1.36
CIITAP33076 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.56□□□□□ -1.36
CIITAP33076 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CIITAP33076 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 RNA5SP510-201ENST00000364697 99 ntBASIC6.56□□□□□ -1.36
CIITAP33076 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.56□□□□□ -1.36
CIITAP33076 AC013268.2-201ENST00000420753 337 ntBASIC6.56□□□□□ -1.36
CIITAP33076 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 MTATP6P11-201ENST00000428071 670 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AL022331.1-201ENST00000429025 477 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.56□□□□□ -1.36
CIITAP33076 SUMO2P3-201ENST00000438311 288 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.56□□□□□ -1.36
CIITAP33076 NDUFA5P8-201ENST00000449019 346 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AL451063.1-201ENST00000450164 1133 ntBASIC6.56□□□□□ -1.36
CIITAP33076 FRG2FP-204ENST00000453982 852 ntBASIC6.56□□□□□ -1.36
CIITAP33076 RPS23P6-201ENST00000466136 431 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AC147055.1-201ENST00000509261 750 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AC074255.1-201ENST00000511259 501 ntBASIC6.56□□□□□ -1.36
CIITAP33076 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.56□□□□□ -1.36
CIITAP33076 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.56□□□□□ -1.36
CIITAP33076 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.56□□□□□ -1.36
CIITAP33076 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CIITAP33076 AP001496.3-201ENST00000580230 913 ntBASIC6.56□□□□□ -1.36
CIITAP33076 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CIITAP33076 MAPK10-350ENST00000641777 965 ntBASIC6.56□□□□□ -1.36
CIITAP33076 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 AL161901.1-201ENST00000624954 3425 ntBASIC6.56□□□□□ -1.36
CIITAP33076 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CIITAP33076 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CIITAP33076 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CIITAP33076 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 CR383656.5-201ENST00000547616 1340 ntBASIC6.55□□□□□ -1.36
CIITAP33076 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CIITAP33076 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
CIITAP33076 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 AL159987.1-201ENST00000347911 293 ntBASIC6.55□□□□□ -1.36
CIITAP33076 RNA5SP394-201ENST00000364216 119 ntBASIC6.55□□□□□ -1.36
CIITAP33076 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
CIITAP33076 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
CIITAP33076 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.55□□□□□ -1.36
CIITAP33076 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms