Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC027271.1-201ENST00000610270 610 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC245407.2-201ENST00000614199 451 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 STMN1P1-201ENST00000617809 440 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AL450226.2-201ENST00000622913 439 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 AC211433.3-201ENST00000623770 375 ntBASIC6.4□□□□□ -1.38
HOXC12P31275 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.4□□□□□ -1.38
HOXC12P31275 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
HOXC12P31275 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC12P31275 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.4□□□□□ -1.39
HOXC12P31275 AL133320.1-201ENST00000621423 2352 ntBASIC6.4□□□□□ -1.39
HOXC12P31275 HSPA8P11-201ENST00000508840 1898 ntBASIC6.4□□□□□ -1.39
HOXC12P31275 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXC12P31275 AC016251.2-201ENST00000623393 3089 ntBASIC6.4□□□□□ -1.39
HOXC12P31275 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC12P31275 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXC12P31275 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXC12P31275 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
HOXC12P31275 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC12P31275 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HOXC12P31275 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HOXC12P31275 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 AP000776.1-201ENST00000530032 1663 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 LCOR-201ENST00000286067 4542 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 AL096816.1-201ENST00000623300 2920 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
HOXC12P31275 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC093719.1-202ENST00000392735 373 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HOXC12P31275 TCEA1P4-201ENST00000415066 844 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 LINC01881-201ENST00000416103 412 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 HCG25-217ENST00000422366 702 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 RPL23AP76-201ENST00000441860 458 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AL591503.2-201ENST00000442314 1005 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC093799.1-201ENST00000452411 499 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AC239798.3-201ENST00000454459 408 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 RANP1-206ENST00000455094 651 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 NDUFA12P1-201ENST00000455914 406 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 IGLV1-62-201ENST00000518003 441 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 RPL10P18-201ENST00000519384 309 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AC020937.1-201ENST00000519677 1013 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.39□□□□□ -1.39
HOXC12P31275 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC016839.1-201ENST00000578162 867 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 SNORD39.2-201ENST00000579995 76 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 VN1R90P-201ENST00000595717 726 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 VN1R82P-201ENST00000601481 356 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AC104073.3-201ENST00000610942 955 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC004836.1-201ENST00000623032 634 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 MIR4278-201ENST00000636094 69 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 AF001550.2-201ENST00000636643 217 ntBASIC6.39□□□□□ -1.39
HOXC12P31275 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.39□□□□□ -1.39
HOXC12P31275 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HOXC12P31275 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HOXC12P31275 Z93929.1-201ENST00000418200 1475 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms