Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.87□□□□□ -1.15
LMNB1P20700 AC087575.1-201ENST00000585087 229 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC7.87□□□□□ -1.15
LMNB1P20700 AC068768.2-201ENST00000602352 343 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.87□□□□□ -1.15
LMNB1P20700 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC7.87□□□□□ -1.15
LMNB1P20700 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 RN7SL787P-201ENST00000613000 284 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 AL139407.1-201ENST00000613826 1175 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
LMNB1P20700 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.87□□□□□ -1.15
LMNB1P20700 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
LMNB1P20700 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 AC074141.1-201ENST00000588129 2995 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
LMNB1P20700 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
LMNB1P20700 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.87□□□□□ -1.15
LMNB1P20700 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.87□□□□□ -1.15
LMNB1P20700 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.87□□□□□ -1.15
LMNB1P20700 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LMNB1P20700 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.86□□□□□ -1.15
LMNB1P20700 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 NEK2P2-201ENST00000438441 1338 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 RNU6-796P-201ENST00000391086 107 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.86□□□□□ -1.15
LMNB1P20700 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.86□□□□□ -1.15
LMNB1P20700 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 AC130360.1-201ENST00000425489 1117 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC7.86□□□□□ -1.15
LMNB1P20700 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC7.86□□□□□ -1.15
LMNB1P20700 AC245517.2-201ENST00000442890 346 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 CRYGGP-201ENST00000443337 145 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC7.86□□□□□ -1.15
LMNB1P20700 AL163193.1-201ENST00000444895 788 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
LMNB1P20700 MTND1P29-201ENST00000448112 647 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 RPS14P8-201ENST00000478778 369 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 AC083906.1-201ENST00000509298 406 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 OR4D12P-201ENST00000509361 911 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AP006245.2-201ENST00000522004 300 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 KCTD9P6-201ENST00000522306 950 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AC130365.2-201ENST00000525882 1201 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC7.86□□□□□ -1.15
LMNB1P20700 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.86□□□□□ -1.15
LMNB1P20700 TPRX1P1-201ENST00000557620 319 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 UBA2-208ENST00000592791 910 ntTSL 2 BASIC7.86□□□□□ -1.15
LMNB1P20700 AC008121.2-201ENST00000614647 523 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AC017037.3-201ENST00000625016 472 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 TSHZ2-205ENST00000626626 670 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 CTAGE11P-201ENST00000451540 2353 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
LMNB1P20700 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.86□□□□□ -1.15
LMNB1P20700 UG0898H09-202ENST00000623646 7040 ntBASIC7.86□□□□□ -1.15
LMNB1P20700 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 Z98755.1-201ENST00000407015 1384 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 DDX43P2-201ENST00000604753 1354 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC7.85□□□□□ -1.15
LMNB1P20700 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.85□□□□□ -1.15
LMNB1P20700 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
LMNB1P20700 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.85□□□□□ -1.15
LMNB1P20700 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
LMNB1P20700 AL449283.1-202ENST00000418249 604 ntBASIC7.85□□□□□ -1.15
LMNB1P20700 MTND2P18-201ENST00000419962 1030 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms