Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
ATF4P18848 RPL21P132-201ENST00000331267 462 ntBASIC6.33□□□□□ -1.4
ATF4P18848 RNU4-21P-201ENST00000362802 126 ntBASIC6.33□□□□□ -1.4
ATF4P18848 RNA5SP514-201ENST00000363717 111 ntBASIC6.33□□□□□ -1.4
ATF4P18848 TRBV7-5-201ENST00000390382 345 ntBASIC6.33□□□□□ -1.4
ATF4P18848 SNORD86-201ENST00000391196 86 ntBASIC6.33□□□□□ -1.4
ATF4P18848 SNORA57.2-201ENST00000391265 128 ntBASIC6.33□□□□□ -1.4
ATF4P18848 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 AGR3-202ENST00000402239 563 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 GLS-204ENST00000409428 816 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 SNORA73.3-201ENST00000410213 189 ntBASIC6.33□□□□□ -1.4
ATF4P18848 RNU2-18P-201ENST00000411224 162 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC004022.2-201ENST00000413824 193 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 AL807761.3-201ENST00000427833 329 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 VN1R35P-201ENST00000428102 693 ntBASIC6.33□□□□□ -1.4
ATF4P18848 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 MTND2P20-201ENST00000440805 661 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC023271.1-201ENST00000445936 1090 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 NPM1P39-201ENST00000449818 867 ntBASIC6.33□□□□□ -1.4
ATF4P18848 LINC01007-203ENST00000451953 579 ntTSL 4 BASIC6.33□□□□□ -1.4
ATF4P18848 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC6.33□□□□□ -1.4
ATF4P18848 AC100843.1-201ENST00000475372 550 ntBASIC6.33□□□□□ -1.4
ATF4P18848 RN7SL702P-201ENST00000488394 292 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC108078.3-201ENST00000502633 489 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.33□□□□□ -1.4
ATF4P18848 RN7SKP96-201ENST00000516948 297 ntBASIC6.33□□□□□ -1.4
ATF4P18848 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 AP000859.1-201ENST00000525536 307 ntBASIC6.33□□□□□ -1.4
ATF4P18848 OR52K3P-201ENST00000531655 943 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 AC005833.4-201ENST00000542988 449 ntTSL 3 BASIC6.33□□□□□ -1.4
ATF4P18848 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC6.33□□□□□ -1.4
ATF4P18848 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC6.33□□□□□ -1.4
ATF4P18848 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 RN7SL619P-201ENST00000581753 258 ntBASIC6.33□□□□□ -1.4
ATF4P18848 IGLJCOR18-201ENST00000584002 424 ntBASIC6.33□□□□□ -1.4
ATF4P18848 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 RNU6-88P-201ENST00000606801 100 ntBASIC6.33□□□□□ -1.4
ATF4P18848 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 FAM30B-201ENST00000611556 397 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC079228.1-201ENST00000624774 1049 ntBASIC6.33□□□□□ -1.4
ATF4P18848 AC092184.1-201ENST00000625042 715 ntBASIC6.33□□□□□ -1.4
ATF4P18848 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 OR2L1P-202ENST00000641567 1023 ntBASIC6.33□□□□□ -1.4
ATF4P18848 LINC01739-205ENST00000641890 573 ntBASIC6.33□□□□□ -1.4
ATF4P18848 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 PSG9-209ENST00000621109 2019 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC6.33□□□□□ -1.4
ATF4P18848 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.33□□□□□ -1.4
ATF4P18848 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
ATF4P18848 AC006116.1-201ENST00000587908 2171 ntBASIC6.33□□□□□ -1.4
ATF4P18848 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
ATF4P18848 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ATF4P18848 AC011008.2-201ENST00000624866 3352 ntBASIC6.32□□□□□ -1.4
ATF4P18848 LINC02019-201ENST00000608605 2060 ntBASIC6.32□□□□□ -1.4
ATF4P18848 RAD21L1-203ENST00000409241 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.32□□□□□ -1.4
ATF4P18848 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC6.32□□□□□ -1.4
ATF4P18848 METTL18-202ENST00000310392 1521 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
ATF4P18848 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 RNA5SP250-201ENST00000362534 119 ntBASIC6.32□□□□□ -1.4
ATF4P18848 RNA5SP145-201ENST00000363124 125 ntBASIC6.32□□□□□ -1.4
ATF4P18848 RNA5SP88-201ENST00000365560 109 ntBASIC6.32□□□□□ -1.4
ATF4P18848 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 MIR92A2-201ENST00000385299 75 ntBASIC6.32□□□□□ -1.4
ATF4P18848 IGHV2-5-201ENST00000390597 378 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ATF4P18848 FCRL6-204ENST00000392235 947 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATF4P18848 CREM-214ENST00000395887 849 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms