Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MIR3157-201ENST00000578688 85 ntBASIC6.27□□□□□ -1.41
TPM1P09493 AC090774.2-201ENST00000584708 322 ntBASIC6.27□□□□□ -1.41
TPM1P09493 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
TPM1P09493 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM1P09493 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM1P09493 OR4F13P-202ENST00000560066 2054 ntBASIC6.27□□□□□ -1.41
TPM1P09493 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM1P09493 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM1P09493 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM1P09493 HSPD1P7-201ENST00000447985 1686 ntBASIC6.26□□□□□ -1.41
TPM1P09493 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 AC083843.2-201ENST00000568248 6253 ntBASIC6.26□□□□□ -1.41
TPM1P09493 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TPM1P09493 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TPM1P09493 AL121886.1-201ENST00000358609 435 ntBASIC6.26□□□□□ -1.41
TPM1P09493 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
TPM1P09493 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM1P09493 RNF10P1-201ENST00000418589 369 ntBASIC6.26□□□□□ -1.41
TPM1P09493 KIF4CP-201ENST00000422742 1279 ntBASIC6.26□□□□□ -1.41
TPM1P09493 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM1P09493 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 TUBB4BP6-201ENST00000437576 479 ntBASIC6.26□□□□□ -1.41
TPM1P09493 AC010240.2-201ENST00000445363 1205 ntBASIC6.26□□□□□ -1.41
TPM1P09493 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 PPIAP7-201ENST00000454070 489 ntBASIC6.26□□□□□ -1.41
TPM1P09493 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 AL157777.1-201ENST00000468100 304 ntBASIC6.26□□□□□ -1.41
TPM1P09493 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.26□□□□□ -1.41
TPM1P09493 COX6B1P2-201ENST00000489624 230 ntBASIC6.26□□□□□ -1.41
TPM1P09493 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 USP9YP2-201ENST00000504503 1000 ntBASIC6.26□□□□□ -1.41
TPM1P09493 GAPDHP71-201ENST00000511530 1003 ntBASIC6.26□□□□□ -1.41
TPM1P09493 USP9YP1-201ENST00000513521 1002 ntBASIC6.26□□□□□ -1.41
TPM1P09493 MAST4-IT1-201ENST00000514241 658 ntBASIC6.26□□□□□ -1.41
TPM1P09493 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM1P09493 AP000620.1-201ENST00000527147 504 ntBASIC6.26□□□□□ -1.41
TPM1P09493 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM1P09493 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM1P09493 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 AL139124.1-201ENST00000609123 421 ntBASIC6.26□□□□□ -1.41
TPM1P09493 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM1P09493 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM1P09493 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 AC026523.2-201ENST00000625039 7739 ntBASIC6.26□□□□□ -1.41
TPM1P09493 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM1P09493 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TPM1P09493 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 RPS14P4-201ENST00000415880 418 ntBASIC6.25□□□□□ -1.41
TPM1P09493 AC092865.3-201ENST00000425390 1026 ntBASIC6.25□□□□□ -1.41
TPM1P09493 ARMC4P1-201ENST00000438905 707 ntBASIC6.25□□□□□ -1.41
TPM1P09493 EIF5AP4-201ENST00000441206 465 ntBASIC6.25□□□□□ -1.41
TPM1P09493 TCEA1P3-201ENST00000443005 880 ntBASIC6.25□□□□□ -1.41
TPM1P09493 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 RPS7P10-201ENST00000464254 603 ntBASIC6.25□□□□□ -1.41
TPM1P09493 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 ATP5LP5-201ENST00000483050 299 ntBASIC6.25□□□□□ -1.41
TPM1P09493 RPS17P5-201ENST00000498293 408 ntBASIC6.25□□□□□ -1.41
TPM1P09493 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 AC074255.1-201ENST00000511259 501 ntBASIC6.25□□□□□ -1.41
TPM1P09493 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 AC139697.1-201ENST00000548429 745 ntBASIC6.25□□□□□ -1.41
TPM1P09493 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM1P09493 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM1P09493 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM1P09493 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 OR11H2-202ENST00000641517 1085 ntBASIC6.25□□□□□ -1.41
TPM1P09493 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM1P09493 AC018809.2-201ENST00000602436 3823 ntBASIC6.25□□□□□ -1.41
TPM1P09493 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 AC020633.1-201ENST00000468439 2247 ntBASIC6.25□□□□□ -1.41
TPM1P09493 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
TPM1P09493 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM1P09493 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms