Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.74□□□□□ -1.65
CTSDP07339 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTSDP07339 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CTSDP07339 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CTSDP07339 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTSDP07339 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CTSDP07339 AC005005.4-201ENST00000623789 16698 ntBASIC4.74□□□□□ -1.65
CTSDP07339 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
CTSDP07339 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CTSDP07339 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.73□□□□□ -1.65
CTSDP07339 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 MTCO1P7-201ENST00000419523 1542 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
CTSDP07339 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 RNA5SP326-201ENST00000363209 110 ntBASIC4.73□□□□□ -1.65
CTSDP07339 RN7SKP77-201ENST00000363261 353 ntBASIC4.73□□□□□ -1.65
CTSDP07339 RN7SKP250-201ENST00000363924 321 ntBASIC4.73□□□□□ -1.65
CTSDP07339 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.73□□□□□ -1.65
CTSDP07339 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC4.73□□□□□ -1.65
CTSDP07339 RPL35AP3-201ENST00000414680 288 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.73□□□□□ -1.65
CTSDP07339 AC073465.2-201ENST00000440938 498 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 NXT1P1-201ENST00000458481 316 ntBASIC4.73□□□□□ -1.65
CTSDP07339 RN7SL188P-201ENST00000469842 285 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 AC092865.4-201ENST00000477936 615 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC098818.1-201ENST00000478593 252 ntBASIC4.73□□□□□ -1.65
CTSDP07339 DUTP1-201ENST00000493631 470 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC113367.2-201ENST00000505749 160 ntBASIC4.73□□□□□ -1.65
CTSDP07339 HMGN1P16-201ENST00000508308 283 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC079064.1-201ENST00000528365 362 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AP003033.2-201ENST00000528901 805 ntBASIC4.73□□□□□ -1.65
CTSDP07339 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.73□□□□□ -1.65
CTSDP07339 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 RN7SL230P-201ENST00000580835 303 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AC005828.7-201ENST00000607331 556 ntBASIC4.73□□□□□ -1.65
CTSDP07339 Z95327.3-201ENST00000610385 572 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AL080312.2-201ENST00000613001 630 ntBASIC4.73□□□□□ -1.65
CTSDP07339 AL512652.1-201ENST00000619006 500 ntBASIC4.73□□□□□ -1.65
CTSDP07339 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 AC138965.3-201ENST00000623875 498 ntBASIC4.73□□□□□ -1.65
CTSDP07339 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 OR11H2-202ENST00000641517 1085 ntBASIC4.73□□□□□ -1.65
CTSDP07339 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.73□□□□□ -1.65
CTSDP07339 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
CTSDP07339 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CTSDP07339 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTSDP07339 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.72□□□□□ -1.65
CTSDP07339 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.72□□□□□ -1.65
CTSDP07339 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTSDP07339 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTSDP07339 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTSDP07339 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 MIR130A-201ENST00000385274 89 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AL139158.1-201ENST00000424719 340 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 AC007383.1-201ENST00000445875 636 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.72□□□□□ -1.65
CTSDP07339 TAAR4P-201ENST00000454843 1039 ntBASIC4.72□□□□□ -1.65
CTSDP07339 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.72□□□□□ -1.65
CTSDP07339 RN7SL269P-201ENST00000467795 305 ntBASIC4.72□□□□□ -1.65
CTSDP07339 AC099521.1-201ENST00000482557 334 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms