Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC026826.3-201ENST00000561747 158 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AP005119.1-201ENST00000580956 292 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 MIR7853-201ENST00000584820 132 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AP001437.1-201ENST00000608783 456 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 PCA3_2.1-201ENST00000612507 409 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AL021918.2-201ENST00000613415 194 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AL035661.1-201ENST00000620459 1144 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC117409.1-201ENST00000470499 1310 ntBASIC5.12□□□□□ -1.59
HLA-DPB1P04440 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HLA-DPB1P04440 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 U3.28-201ENST00000391249 210 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RPS4XP5-201ENST00000419038 768 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AL445928.1-201ENST00000435545 222 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RPS12P17-201ENST00000438591 377 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AL445466.1-201ENST00000448432 357 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC068228.1-201ENST00000461723 211 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC023194.2-201ENST00000465398 406 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RPS7P6-201ENST00000485777 579 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RPS17P5-201ENST00000498293 408 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RBBP4P1-201ENST00000502424 1276 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC137627.1-201ENST00000545761 289 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AL359219.2-201ENST00000555184 348 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC073593.1-201ENST00000624500 411 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 IFIT1P1-201ENST00000400497 1449 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 AC130360.2-201ENST00000533477 1556 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 HSPD1P7-201ENST00000447985 1686 ntBASIC5.11□□□□□ -1.59
HLA-DPB1P04440 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HLA-DPB1P04440 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 PARP4P2-201ENST00000446672 3326 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC092376.2-201ENST00000622621 4116 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 RPL24P2-201ENST00000421023 475 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AL590399.4-201ENST00000436561 601 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC110602.1-201ENST00000437414 318 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC023141.8-201ENST00000442554 208 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.1□□□□□ -1.59
HLA-DPB1P04440 RN7SL269P-201ENST00000467795 305 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AP002884.1-201ENST00000479691 655 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 AC008629.2-201ENST00000503783 483 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 PRMT5P1-201ENST00000514351 598 ntBASIC5.1□□□□□ -1.59
HLA-DPB1P04440 RNA5SP340-201ENST00000517132 107 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms