Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC023141.8-201ENST00000442554 208 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 RN7SL362P-201ENST00000494228 267 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC091917.2-201ENST00000505002 744 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.39□□□□□ -1.55
MT-ND1P03886 MRPS5P3-201ENST00000515577 166 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AP001000.1-201ENST00000526843 742 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AL078601.3-201ENST00000573303 535 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC027216.1-201ENST00000577726 685 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC073333.2-201ENST00000603589 769 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 QTRT1P1-201ENST00000604344 1078 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC015819.1-201ENST00000613588 663 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.39□□□□□ -1.55
MT-ND1P03886 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.39□□□□□ -1.55
MT-ND1P03886 GNL2P1-201ENST00000451274 2190 ntBASIC5.39□□□□□ -1.55
MT-ND1P03886 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
MT-ND1P03886 CDC27P2-201ENST00000425026 1922 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MT-ND1P03886 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MT-ND1P03886 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 RN7SKP69-201ENST00000365390 305 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
MT-ND1P03886 MIR191-201ENST00000384873 92 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 BX119904.3-201ENST00000428194 957 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AL359265.1-201ENST00000440296 795 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 KF459542.1-201ENST00000450908 553 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 PPIAP7-201ENST00000454070 489 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 CTSLP6-201ENST00000458273 1002 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 DUTP1-201ENST00000493631 470 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC113367.2-201ENST00000505749 160 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 MAST4-IT1-201ENST00000514241 658 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AP000620.1-201ENST00000527147 504 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC004232.2-201ENST00000574245 821 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC092681.3-201ENST00000609463 678 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 FAM27E2-201ENST00000619668 403 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.38□□□□□ -1.55
MT-ND1P03886 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.38□□□□□ -1.55
MT-ND1P03886 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
MT-ND1P03886 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
MT-ND1P03886 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
MT-ND1P03886 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
MT-ND1P03886 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
MT-ND1P03886 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
MT-ND1P03886 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms