Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
LDLRP01130 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 RNA5SP453-201ENST00000362503 119 ntBASIC5.78□□□□□ -1.48
LDLRP01130 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 RN7SKP278-201ENST00000410504 342 ntBASIC5.78□□□□□ -1.48
LDLRP01130 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.78□□□□□ -1.48
LDLRP01130 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.78□□□□□ -1.48
LDLRP01130 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.78□□□□□ -1.48
LDLRP01130 RPL5P2-201ENST00000429598 854 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 MYO5BP2-201ENST00000449815 1277 ntBASIC5.78□□□□□ -1.48
LDLRP01130 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 RN7SL352P-201ENST00000466002 277 ntBASIC5.78□□□□□ -1.48
LDLRP01130 RN7SL104P-201ENST00000498686 293 ntBASIC5.78□□□□□ -1.48
LDLRP01130 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 SUMO2P4-201ENST00000504193 276 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.78□□□□□ -1.48
LDLRP01130 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.78□□□□□ -1.48
LDLRP01130 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 SETP21-201ENST00000514799 892 ntBASIC5.78□□□□□ -1.48
LDLRP01130 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 snoU109.5-201ENST00000516231 132 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.78□□□□□ -1.48
LDLRP01130 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 AC092332.1-201ENST00000563684 829 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AC016180.1-201ENST00000567945 403 ntBASIC5.78□□□□□ -1.48
LDLRP01130 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 AC125494.2-201ENST00000602431 657 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AC008536.1-201ENST00000602872 669 ntBASIC5.78□□□□□ -1.48
LDLRP01130 BX322635.1-201ENST00000605804 496 ntBASIC5.78□□□□□ -1.48
LDLRP01130 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.78□□□□□ -1.48
LDLRP01130 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LDLRP01130 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
LDLRP01130 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.78□□□□□ -1.48
LDLRP01130 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 AC027279.4-201ENST00000624371 2072 ntBASIC5.78□□□□□ -1.48
LDLRP01130 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LDLRP01130 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.78□□□□□ -1.48
LDLRP01130 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC092451.3-201ENST00000625067 1343 ntBASIC5.77□□□□□ -1.49
LDLRP01130 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 RPL31P11-201ENST00000426558 1558 ntBASIC5.77□□□□□ -1.49
LDLRP01130 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LDLRP01130 RNU6-891P-201ENST00000384280 111 ntBASIC5.77□□□□□ -1.49
LDLRP01130 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LDLRP01130 AL157702.1-201ENST00000398764 426 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC094019.1-201ENST00000434678 472 ntBASIC5.77□□□□□ -1.49
LDLRP01130 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.77□□□□□ -1.49
LDLRP01130 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.77□□□□□ -1.49
LDLRP01130 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.77□□□□□ -1.49
LDLRP01130 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.77□□□□□ -1.49
LDLRP01130 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.77□□□□□ -1.49
LDLRP01130 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.77□□□□□ -1.49
LDLRP01130 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.77□□□□□ -1.49
LDLRP01130 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.77□□□□□ -1.49
LDLRP01130 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.77□□□□□ -1.49
LDLRP01130 RN7SL714P-201ENST00000487050 298 ntBASIC5.77□□□□□ -1.49
LDLRP01130 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LDLRP01130 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.77□□□□□ -1.49
LDLRP01130 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.77□□□□□ -1.49
LDLRP01130 TOMM22P4-201ENST00000511318 336 ntBASIC5.77□□□□□ -1.49
LDLRP01130 PRMT5P1-201ENST00000514351 598 ntBASIC5.77□□□□□ -1.49
LDLRP01130 TPM3P3-201ENST00000521343 354 ntBASIC5.77□□□□□ -1.49
LDLRP01130 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.77□□□□□ -1.49
LDLRP01130 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.77□□□□□ -1.49
LDLRP01130 AC244502.2-201ENST00000543361 851 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms